| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0465 |
|---|
| Symbol | |
|---|
| ID | 5708620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 504842 |
|---|
| End bp | 505885 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641274968 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001540300 |
|---|
| Protein GI | 159041048 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0993329 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGTTA AAGTGGGGAT ACTTGGTTCA GGCTTCGCGG CTGAATTCCA CATGCAGTCA
TACGCCGAAA TACCCAACGC TAAGGTTGTT GCAGTTGCAT CCAGGAGTAG GGCCGTTGAA
TTTGCTGGCA GGTGGGGGAT AGGAAAGTAC TATACTGGCG ATGACTTCAT TGAGAAGCTG
TGCAGTGATA AGGAGGTGGA TGTTGTTGAT ATTATTTTAC CCAACTTCCT ACACCTTAAG
GCTGTTCAAT TATGTGCTGA GAATAGGAAG AACATAATTA TTGAGAAGCC CCTGGGTAGG
AACCTAACTG AGGCTAAGGA GATGCTTAAC GCAGTTAATA GGTATGGTGT ACTCCACGCC
TATGCTGAGA ACCAGGTCTT CATACCCCAG ATTGATAGGG TTATGAACAT GGTTAGGAAT
GGGGCTATTG GTAAGGTATT CTGGGTTAGG AGTAGGGAGG CCCACTTCGG GCCCCATAGC
CCGTGGTTCT GGGACAAGGA CCTATCCGGT GGTGGTAGTT TACTGGACAT GGGGTGCCAC
TCCATTGAGG TTACCAGGAA GTTGATTAAC GGTAAGGCAA GTGAAGTTTT AGGCTGGGGT
GACTTGCTTG TCCACAGGGA TAAGACTAAG GCCGAGGATA ACAGTATAGT TCTAGTTAAG
TATAATGGGG GTGAGTTGGG GCAGGCTGAG AATAGTTGGG CAGCCCACGG TGGCTTGGAC
CTGAGGTATG AGATATACGG TAGTGAGGGG GCAATCTTCG TTGATGTAAC CAGGGAGACT
GGGATAAGGG TATTCACCAC GGCCCCAGAG GAGAGGGTTG GTTACGTGGT TGAGAAGGCT
GAGGTGGCTA GGGGTTGGCT TTACCCAATT TGGAGGGAAT TTGAGCTATA TGGTTACTTA
TATGAGCTTA GGCACTTCAT AGACTCCTTT GAGAGGGGTG AGTTACCGAG GGAGAACTTT
AATGATGGTG TTGAGGTTAA TAGGATAATT GATGCAGCCT ACAGGTCCTT TAAGAGTAAA
AGGTGGGAGC CTTTGAGCGA TTAA
|
|---|
| Protein sequence | MVVKVGILGS GFAAEFHMQS YAEIPNAKVV AVASRSRAVE FAGRWGIGKY YTGDDFIEKL
CSDKEVDVVD IILPNFLHLK AVQLCAENRK NIIIEKPLGR NLTEAKEMLN AVNRYGVLHA
YAENQVFIPQ IDRVMNMVRN GAIGKVFWVR SREAHFGPHS PWFWDKDLSG GGSLLDMGCH
SIEVTRKLIN GKASEVLGWG DLLVHRDKTK AEDNSIVLVK YNGGELGQAE NSWAAHGGLD
LRYEIYGSEG AIFVDVTRET GIRVFTTAPE ERVGYVVEKA EVARGWLYPI WREFELYGYL
YELRHFIDSF ERGELPRENF NDGVEVNRII DAAYRSFKSK RWEPLSD
|
|---|
| |