Gene Cmaq_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0452 
Symbol 
ID5708516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp489354 
End bp490664 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content46% 
IMG OID641274955 
Productphosphomethylpyrimidine kinase 
Protein accessionYP_001540287 
Protein GI159041035 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 
TIGRFAM ID[TIGR00097] phosphomethylpyrimidine kinase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.70912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTTA AGTTACCCAA GGCATTAACA ATAGCAGGCC TGGACTCAGG GGGTGGGGCT 
GGTATTACGG CTGATTTAAA GACATTCCAC GCCATGGGGG TTTACGGCAT GGTTGCGTTA
ACCGCTGTCA CCGCTCAGAA CACGCTTGGT GTTAAGGCAG TTCAGGAGAT TGAACCCAGT
ATTGTTGAGG CCCAGATTAA CGCTGTTGCT GAGGATATTG GTGTTGATGC GGCTAAGACC
GGTATGCTGA GTAGTTCACC TATAATGGAG AGCGTGGCTA AGGTAGTTAG GAGGTGGGGA
TTCCCATTAG TTGTAGATCC TGTAATGTAT GCTAAGAGCG GGGACCCATT AATGAGGCAG
GATGCCATTG ATACCTTAAG GAGAACCATA ATTCCCCTAG CCAAGGTGGT AACCCCAAAT
ATCCCTGAGG CTGAAGCCTT ATCTGGAGTC AGCATTAGGA ACCTTAATGA TGCTAAGGCA
GCGGCTAAGA GGATTGCGGA GGAGTTTCAC CCCGAAATCG TTATAGTTAA GGGTGGGCAC
CTTACGGGTG CTGAGAGCAT TGACGTGGTT TACTTTAGGG ATAATGGTGA ATACAGGGAA
TTGAGCGCAC CCAGGATTAG TACAGGAAAC ACCCACGGTA CTGGATGCAG CTTCTCAGCA
GCCATAGCTG CTGGTTTAGC TAAAGGTATG AGTCCTTGGG ACTCCATTAA GCAGGCTAAG
GAGTTAATAA CAATGGCTAT TCAGTACTCC CTACCCCTGG GTCATGGTCA TGGTCCAGTT
AACCCAATGT CATGGATTGA GTTAAGGGCT TATAGGTATG ATGCTGTGAT GGATTTAAGC
AATGCAATGA GTATTATTAA GAATAAGGTA GGTGAGTTAA TTGACTCTCA GGATAATGGT
GGCATAGCCG TTACTCCACC ACAACCCTAC GCCATTGATC CAAGTAATGT GATTACAGTA
ACCTGGAGGA GTATTGAGGA AGGGTTACCA ATCAGCATAA TTACGCGTAG CGGTGGTGGT
CGCCTAGTTA AGTACGCCTT AGGCATGGTT AACAGTAATC CGGAGTTAAG GGCGTTACTG
CTCATAAGTG GTTTAAGTAA CCTAATAAGT AGGGTCAAGA GAGTGTTAAG TACGTATGAG
TATGGTTTAA GCAGAGATGA GGCAAGACTC ATTAGTAGCG CGCTCACTGA GGCTTTAAGG
TCATTGAATA GAGTACCTGA CGCCATTCAC TTAACCAGCT TTAATGATCT CGTTATAATG
GGTGAATCAG CCACCGCTGT GGTTAATAAG TTAATGAAGG CGCTTAGTTA A
 
Protein sequence
MAVKLPKALT IAGLDSGGGA GITADLKTFH AMGVYGMVAL TAVTAQNTLG VKAVQEIEPS 
IVEAQINAVA EDIGVDAAKT GMLSSSPIME SVAKVVRRWG FPLVVDPVMY AKSGDPLMRQ
DAIDTLRRTI IPLAKVVTPN IPEAEALSGV SIRNLNDAKA AAKRIAEEFH PEIVIVKGGH
LTGAESIDVV YFRDNGEYRE LSAPRISTGN THGTGCSFSA AIAAGLAKGM SPWDSIKQAK
ELITMAIQYS LPLGHGHGPV NPMSWIELRA YRYDAVMDLS NAMSIIKNKV GELIDSQDNG
GIAVTPPQPY AIDPSNVITV TWRSIEEGLP ISIITRSGGG RLVKYALGMV NSNPELRALL
LISGLSNLIS RVKRVLSTYE YGLSRDEARL ISSALTEALR SLNRVPDAIH LTSFNDLVIM
GESATAVVNK LMKALS