| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0443 |
|---|
| Symbol | |
|---|
| ID | 5709926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 478089 |
|---|
| End bp | 478730 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641274946 |
|---|
| Product | GDSL family lipase |
|---|
| Protein accession | YP_001540278 |
|---|
| Protein GI | 159041026 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.665716 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAAGC CCACTTTTAA TGCAGGTGAT AAGTTAGTCT TCATAGGTGA TAGTATAACT
GATAGTGGTA GGAGGGATGC AGCTCCTCCT CTGGGTAATG GTTATGTAGC CTTCTTTAAG
GATATTGTTG ATTCACAGCA CCCTGAACTA ATGCTTAATG TAATTAATAA AGGTATTAGC
GGTAATACTA TACGTGACCT TAAGGAGAGG TGGGAGGATG ATGTGATTTC ACTTAAGCCG
AGGCTTGTTT CAGTGCTAAT AGGTATTAAT GATGCCCACA GGTTCCTGGG GGGTGACTTA
GGGTTATCTC CTGATGATTA CTATAAAATG TACAGTGAGG TGCTTGACTT AACAATTAAG
AGAATTAACC CGGTGATACT GTTGATTGCG CCATTCTATG TGAGTAAGGC TAATGAGTTA
GACACCTTTA GGAGGAAGGT GCTTCAACTG GTATCCGAGT ACGTTAAGAG GGTTGAGAGG
CTTAGCGCCG AGTACTCGAC ACTATTCATT AATCTTCATG AGGAGTTTCA AGCGAGGTTA
AGTTACATTG AGCCTGAGGC TCTAGCCCCT GATGCAGTTC ACCCAACTAG GAAGGGGCAC
ATGCTCATTG CGTTAAAGAT CTATGATAAG CTTCTTAGTT AA
|
|---|
| Protein sequence | MVKPTFNAGD KLVFIGDSIT DSGRRDAAPP LGNGYVAFFK DIVDSQHPEL MLNVINKGIS
GNTIRDLKER WEDDVISLKP RLVSVLIGIN DAHRFLGGDL GLSPDDYYKM YSEVLDLTIK
RINPVILLIA PFYVSKANEL DTFRRKVLQL VSEYVKRVER LSAEYSTLFI NLHEEFQARL
SYIEPEALAP DAVHPTRKGH MLIALKIYDK LLS
|
|---|
| |