Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0442 |
Symbol | |
ID | 5709925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 477235 |
End bp | 478008 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641274945 |
Product | NAD-dependent deacetylase |
Protein accession | YP_001540277 |
Protein GI | 159041025 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.869498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAATG GGGAATGCTT AGAAGGTGGT AGGAAGGCTG CAGTGATACT TACTAGCAGT AGACATGCGA TAGCATTCAC TGGCGCTGGT ATAAGTACTG AAAGCGGTAT ACCAGACTTC AGGGGTCCTC AGGGTCTTTG GAGGAGGTTT GACCCAGCAT TAGCATCCAT TGATTACCTA AACACCGATC CCAAGGGCTT CTGGGAATTC TACATTGAGA GGTTCCGTGT ACTTAATAAT GCGAGACCCA ATAAGGCTCA CCTAGCGTTA GCTGAATTGG AGAAGCTAGG TATTATTAAG TACGTGATAA CTCAGAACAT TGATAATCTT CATCAATCAG CGGGATCAAT CAATGTAATC GAGCTTCACG GTAACTACAC AACCGTGTAC TGCATGAGAT GTAAGACCCA GTACCCGTTT ACATTAGCCT TAAGAAAGTA TGAGGAGGGT GAGAATCCTC CAAGGTGCCC AAAATGCGGT GGAATCCTTA GACCCAATGT GGTTCTCTTC GGTGAACCAG TTAATGAGAT TAATAGGGCT CTTGAGATAG CTGCCTTAAG TGACGTAGCC CTGGTGGTTG GTTCATCATT AACGGTGTAT CCTGCAGCCT ACGTACCCCT CGTGGTTAAG GAGCATGGTG GTAGATTAAT AATCATTAAC CTGGAACCCA CTGATTACGA TGACTACGCG GACGTGGTGC TGCATTGCAG TGCCTCGGAG GCATTAGACC TAGTACTTAA TGAGGTTAAA GGCATTATGG CGGCAGGTAA TTAA
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Protein sequence | MGNGECLEGG RKAAVILTSS RHAIAFTGAG ISTESGIPDF RGPQGLWRRF DPALASIDYL NTDPKGFWEF YIERFRVLNN ARPNKAHLAL AELEKLGIIK YVITQNIDNL HQSAGSINVI ELHGNYTTVY CMRCKTQYPF TLALRKYEEG ENPPRCPKCG GILRPNVVLF GEPVNEINRA LEIAALSDVA LVVGSSLTVY PAAYVPLVVK EHGGRLIIIN LEPTDYDDYA DVVLHCSASE ALDLVLNEVK GIMAAGN
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