Gene Cmaq_0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0442 
Symbol 
ID5709925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp477235 
End bp478008 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content46% 
IMG OID641274945 
ProductNAD-dependent deacetylase 
Protein accessionYP_001540277 
Protein GI159041025 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.869498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAATG GGGAATGCTT AGAAGGTGGT AGGAAGGCTG CAGTGATACT TACTAGCAGT 
AGACATGCGA TAGCATTCAC TGGCGCTGGT ATAAGTACTG AAAGCGGTAT ACCAGACTTC
AGGGGTCCTC AGGGTCTTTG GAGGAGGTTT GACCCAGCAT TAGCATCCAT TGATTACCTA
AACACCGATC CCAAGGGCTT CTGGGAATTC TACATTGAGA GGTTCCGTGT ACTTAATAAT
GCGAGACCCA ATAAGGCTCA CCTAGCGTTA GCTGAATTGG AGAAGCTAGG TATTATTAAG
TACGTGATAA CTCAGAACAT TGATAATCTT CATCAATCAG CGGGATCAAT CAATGTAATC
GAGCTTCACG GTAACTACAC AACCGTGTAC TGCATGAGAT GTAAGACCCA GTACCCGTTT
ACATTAGCCT TAAGAAAGTA TGAGGAGGGT GAGAATCCTC CAAGGTGCCC AAAATGCGGT
GGAATCCTTA GACCCAATGT GGTTCTCTTC GGTGAACCAG TTAATGAGAT TAATAGGGCT
CTTGAGATAG CTGCCTTAAG TGACGTAGCC CTGGTGGTTG GTTCATCATT AACGGTGTAT
CCTGCAGCCT ACGTACCCCT CGTGGTTAAG GAGCATGGTG GTAGATTAAT AATCATTAAC
CTGGAACCCA CTGATTACGA TGACTACGCG GACGTGGTGC TGCATTGCAG TGCCTCGGAG
GCATTAGACC TAGTACTTAA TGAGGTTAAA GGCATTATGG CGGCAGGTAA TTAA
 
Protein sequence
MGNGECLEGG RKAAVILTSS RHAIAFTGAG ISTESGIPDF RGPQGLWRRF DPALASIDYL 
NTDPKGFWEF YIERFRVLNN ARPNKAHLAL AELEKLGIIK YVITQNIDNL HQSAGSINVI
ELHGNYTTVY CMRCKTQYPF TLALRKYEEG ENPPRCPKCG GILRPNVVLF GEPVNEINRA
LEIAALSDVA LVVGSSLTVY PAAYVPLVVK EHGGRLIIIN LEPTDYDDYA DVVLHCSASE
ALDLVLNEVK GIMAAGN