Gene Cmaq_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0435 
Symbol 
ID5709902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp469318 
End bp470118 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content46% 
IMG OID641274938 
Productxylose isomerase domain-containing protein 
Protein accessionYP_001540270 
Protein GI159041018 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTAG CCTTCACCAG CCTAGCCTAC CCTGAATTAA CGCTAAGTGA GGTTCTTGAG 
AGAGTTAGGA GGTTTGGCTT TGATGGACTT GAGTTAAGGG TTGCTGAGGA TGGACAACAC
TTGAAGCCAA TATACCCAGT ACCTAAGCAG GATTACGAGT TAATTAAATC CTCAGGAATC
AAGTTAAGTA ACCTAGCCGG CTACGCCTCC TTCGCCATGC CTAATGAACA GGAGAGGGCT
AGGAATGAGG AAACCCTGAG GACACTCATA TTAATTGCCA GGGAATTAGA GGCCACTGGG
GTTAGGGTTT ACGGGGGTAG GGTTACTGAT GATGTTGAAA AGGCCGCTGA GAGAATAATT
ACTTCACTTA ATAGGGTTGT CAAGTTCGCT GAGGATAATG GAGTTGTCAT AATGATGGAG
ACCCATGATG ACTGGGTTAA GGCAAATAAC CTCAGGAGGC TTCTCAATGG TCTTGATGAG
GGCATAGGTA TTTTACTCGA CTTCGCCAAC GTGGTTGCAG CTGGGGAGAA TCTTGATAAT
GTCCTTGAGT TGGTTAAGGG GAGGGTAAGG CATGTTCATG TTAAGAACTT TAAACTAATT
AACGGTAAGA TCAGGTACAC TACACCAGAT GACCCAGCTG GATTAGTGCC GATTAAGAGG
GTGGTTGATT ACTTAAGGGG TATTGGCTTC AACGGCTACT TATCGGTTGA GTGGGAGAAG
AAGTGGCACC CTGAATTAGA GCCTGCCGAT GAAGTGCTAC CCAAGTACCT AAGCTACCTG
AGGAGTATAA TTAACGCCTA A
 
Protein sequence
MKLAFTSLAY PELTLSEVLE RVRRFGFDGL ELRVAEDGQH LKPIYPVPKQ DYELIKSSGI 
KLSNLAGYAS FAMPNEQERA RNEETLRTLI LIARELEATG VRVYGGRVTD DVEKAAERII
TSLNRVVKFA EDNGVVIMME THDDWVKANN LRRLLNGLDE GIGILLDFAN VVAAGENLDN
VLELVKGRVR HVHVKNFKLI NGKIRYTTPD DPAGLVPIKR VVDYLRGIGF NGYLSVEWEK
KWHPELEPAD EVLPKYLSYL RSIINA