Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0435 |
Symbol | |
ID | 5709902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 469318 |
End bp | 470118 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641274938 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_001540270 |
Protein GI | 159041018 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTAG CCTTCACCAG CCTAGCCTAC CCTGAATTAA CGCTAAGTGA GGTTCTTGAG AGAGTTAGGA GGTTTGGCTT TGATGGACTT GAGTTAAGGG TTGCTGAGGA TGGACAACAC TTGAAGCCAA TATACCCAGT ACCTAAGCAG GATTACGAGT TAATTAAATC CTCAGGAATC AAGTTAAGTA ACCTAGCCGG CTACGCCTCC TTCGCCATGC CTAATGAACA GGAGAGGGCT AGGAATGAGG AAACCCTGAG GACACTCATA TTAATTGCCA GGGAATTAGA GGCCACTGGG GTTAGGGTTT ACGGGGGTAG GGTTACTGAT GATGTTGAAA AGGCCGCTGA GAGAATAATT ACTTCACTTA ATAGGGTTGT CAAGTTCGCT GAGGATAATG GAGTTGTCAT AATGATGGAG ACCCATGATG ACTGGGTTAA GGCAAATAAC CTCAGGAGGC TTCTCAATGG TCTTGATGAG GGCATAGGTA TTTTACTCGA CTTCGCCAAC GTGGTTGCAG CTGGGGAGAA TCTTGATAAT GTCCTTGAGT TGGTTAAGGG GAGGGTAAGG CATGTTCATG TTAAGAACTT TAAACTAATT AACGGTAAGA TCAGGTACAC TACACCAGAT GACCCAGCTG GATTAGTGCC GATTAAGAGG GTGGTTGATT ACTTAAGGGG TATTGGCTTC AACGGCTACT TATCGGTTGA GTGGGAGAAG AAGTGGCACC CTGAATTAGA GCCTGCCGAT GAAGTGCTAC CCAAGTACCT AAGCTACCTG AGGAGTATAA TTAACGCCTA A
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Protein sequence | MKLAFTSLAY PELTLSEVLE RVRRFGFDGL ELRVAEDGQH LKPIYPVPKQ DYELIKSSGI KLSNLAGYAS FAMPNEQERA RNEETLRTLI LIARELEATG VRVYGGRVTD DVEKAAERII TSLNRVVKFA EDNGVVIMME THDDWVKANN LRRLLNGLDE GIGILLDFAN VVAAGENLDN VLELVKGRVR HVHVKNFKLI NGKIRYTTPD DPAGLVPIKR VVDYLRGIGF NGYLSVEWEK KWHPELEPAD EVLPKYLSYL RSIINA
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