Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0424 |
Symbol | |
ID | 5709528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 458197 |
End bp | 459666 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641274927 |
Product | type II secretion system protein E |
Protein accession | YP_001540259 |
Protein GI | 159041007 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.983223 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGTTA CTGATTACGC TGCATTAGAT GGATTAGTCC AAGTATCGAT ACTAATGAGT AGGGATGGCC AATACATTTA CTGGGTTGAG GAACCTAAGT TAAGTAAGGA GGAGGAGAAG CTACTCCTAA GGATTAGGGA TGAGTTAGTG AGGTTAATGA GCGCTAAGAA TGCGCCATCA ATATACGATT ACGGTAATGT TAAGGAGTAC GTTAAGGGTA TTGCTGAATC ATTAATTAGG CGTTACGCAC CCGGTATTAG CACTGAGGGG GTTAGGAGAA TAATGTACTA CATATTGAAG AACACTGTTG GCTTCGGTTC CATTGAGCCT CTTGTTAATG ATCCTAGGGT TGAGGATATT CACATTAATG GCCCAGATAG GAGTGTTTAC GTGTGGCATA ATAGGTATGG TCATATTAAG ACTAATATAA GCATCAGTGA TGATGAGTTA AACAGGTTAG TGACCCTCCT CTCCCAGAGG ATAAGGAGGA ACCCCAGTTC AGCGTCACCA ATACTTGAGG GACTTCTAAT ACCTGAGAAC CTAAGGGTTG AGATACTGCT TAGGGATGTT GCCTCAATAG GCCCAGTGAT TACTATTAGG AAGTTTAGGG AAGCGCCTTT AACCGTAGTG GAGATGATTA AGCTAGGTAC CTTAAGCAGT AGGCTGGCTG CCTACCTATG GTTCATGCTT GACCACGGAG TCAGCATACT CATAATAGGA CCCACTGGCG CAGGGAAGAC CACACTACTT AATGCACTAC TCTTCCTCGT CAGGAATGGG CTCAGGATAA TTACAATTGA GGATGCTAGG GAATTATATC TGCTTCACGA CCACTGGGTG CCCCTGGTGG CTAGGACCTC TGAGGCTCCC GGTGTAGCTA ATGTTGATCT GTATGAATTG GTTAAGGTAT CCATGAGGCT TAGGCCCGAT TACATTGTTG TTGGTGAATT AAGGGGTGAG GAATCATACG TCTTCTTCCA GGCATTGGCA AGTGGGCACA CTGGATTATC CACACTTCAC GCCTACTCAG CTGAAATGGC GATTAGGAGA CTGTTGTCTA AACCCATGGA AATACCTGCA ACACTATTAA CGTCACTGGG CGTTATTGTG CAGATAAGCG TCGTGGCTAA GAATGATGAG ATAACCAGGA GGGTTACTAG GGTTGAGGAG GTTATTGATG TTCAGGAGGA TAGACCTGTG CTTAACAGGG TTTTTGAATG GAGGAGGAGT GATGATAGTA TAGTTAATGC GAATGATTCA GTACTAGTGA GTAGGATTAT TGAGAACCAC GCCCTACAAC CTGATGAGGT TAAGGCTGAG TTGGATAGGA GGGAGAAATT CATATCACTC ATGGTTAAGA ACAACATAAC ATCCCCCAGC AGTGTCTTTG AAATAATAAA TAAGTACTAC ATGAACCCTG AGGAGGCCTT CAATGAGTTG AATAAAGGCA AGACCAGTGA GGGTAAGTGA
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Protein sequence | MHVTDYAALD GLVQVSILMS RDGQYIYWVE EPKLSKEEEK LLLRIRDELV RLMSAKNAPS IYDYGNVKEY VKGIAESLIR RYAPGISTEG VRRIMYYILK NTVGFGSIEP LVNDPRVEDI HINGPDRSVY VWHNRYGHIK TNISISDDEL NRLVTLLSQR IRRNPSSASP ILEGLLIPEN LRVEILLRDV ASIGPVITIR KFREAPLTVV EMIKLGTLSS RLAAYLWFML DHGVSILIIG PTGAGKTTLL NALLFLVRNG LRIITIEDAR ELYLLHDHWV PLVARTSEAP GVANVDLYEL VKVSMRLRPD YIVVGELRGE ESYVFFQALA SGHTGLSTLH AYSAEMAIRR LLSKPMEIPA TLLTSLGVIV QISVVAKNDE ITRRVTRVEE VIDVQEDRPV LNRVFEWRRS DDSIVNANDS VLVSRIIENH ALQPDEVKAE LDRREKFISL MVKNNITSPS SVFEIINKYY MNPEEAFNEL NKGKTSEGK
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