Gene Cmaq_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0413 
Symbol 
ID5708776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp448494 
End bp449186 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content46% 
IMG OID641274916 
Productacetyl/acyl transferase related protein 
Protein accessionYP_001540248 
Protein GI159040996 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTCA TATCAAGTAG AGCAAAGGTA GATGAGGCTG TAATTGGATT AAACTCAGTG 
ATACTGGGGC CATCGGTAAT TGGTAGGGGG AGTTTCATTG ATGATTACGT GACTGTAGGC
TACCCTATTA GGCGGAAGAT TAAGACCATT AAGCATATTA ATGAACTTGA TTCAGTTAGT
GACGGTGCCA GGATTGGGGA GGGGTGTGTG ATAAGGAGGG GTACGGTTAT TTACGAGAGT
GTTGAAGTGG GTAATAATGT TGAGACCGGG CATAACGTGT TAATTAGGGA GAACACGGTG
ATTGGGGATG GGACTAGGTT AGGTACTTTA ACTGTGATTG ATGGTGGCGT TAAGATAGGT
AGGAATGTGA GCGTGCAGAG TATGGTTTAC ATACCCATAG GTACTGTAAT AGAGGATGAG
GTCTTCATAG GGCCAAACGC AGTGATAACT AATGATAAGT ACCCACCCAG TAGAAGGCTT
CAAGGCGTGG TTATTAGGAG GGGGGCTGTT ATTGGTGCTA ACGCCACTTT AATAGCTGGT
ATCGAGATTG GGGAGGGGGC TGTGGTGGCT GCTGGGTCAA TAGTGACTAA GGATGTTAAG
CCAGGAACTG TTGTCGCTGG TGCCCCAGCT AGACCCATGT ACGGTGTTGA TGTGTACGTT
GAAAAGAGGA GGGCTTATGA ATCAATGGGT TAA
 
Protein sequence
MGFISSRAKV DEAVIGLNSV ILGPSVIGRG SFIDDYVTVG YPIRRKIKTI KHINELDSVS 
DGARIGEGCV IRRGTVIYES VEVGNNVETG HNVLIRENTV IGDGTRLGTL TVIDGGVKIG
RNVSVQSMVY IPIGTVIEDE VFIGPNAVIT NDKYPPSRRL QGVVIRRGAV IGANATLIAG
IEIGEGAVVA AGSIVTKDVK PGTVVAGAPA RPMYGVDVYV EKRRAYESMG