| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0405 |
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| Symbol | |
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| ID | 5709513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 440014 |
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| End bp | 441303 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641274908 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001540240 |
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| Protein GI | 159040988 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00105 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGGA GTAACATTGT TAAACTGATT GTGGATGAAG AGACTAAGAA GAGGTTGCTT
GGTCTATTGG AAGTGTATAG GGCTTGTTGG AATACTGTTA ATTGGCTTAG GATGCAGCAG
TTTAAAAACC ATGAAAGAGT GGGCTTCGGA GAGACCGAGA AAGAAACATA TGAGAAGTTT
AAGCGAATCC TAAAAGTCAA TGCACAGCAG GTTACTAGGA AGAATGCTGA GGCTTGGCGT
TCATTTTTCG CTTTAATAAA AGAGAAGAGG CAAAACAAGA ACTTAAAGCC AAGACCGCCG
GGCTATTGGA AGCAAGGCAT CATTCTTGTT AGAAATGATA GGTACACTAT TGATGAGGAG
AAACGTGAGA TTTACCTTAA GGACTTCAAG ATGAGGTTAA AGTACGCCGG TAAGTTGAAA
TGGAAAGGGA AACAAGGCAG ACTTGAAATA CATTATGATG AAGTTAGGGG GAGGTTTTAC
GCATTCATAC CAATGAGTGT TGAGGACGTT AAACCAAAGG AGAGTGGATT AAAGGCATCT
ATTGATTTAG GGATAGTGAA CTTAGTAACA ATGTTCATAG AGAATGGAAA ATGGTTTCTC
TTCAAAGGTG GTTCTATTCT CTCACAGTAC GAGTATTATA GCAAAAAGAT AGCCATAACA
CAGAAGAAAT TAGCCTTGCA TGGGCAGAGG AGGAGTAGGA GATTAAGCAT GTTATATAGG
AAAAGAAGCC TATTCATGAG GCACGTAGTA AATTCAATGG TGAGGAGGAT AATGAATATA
CTTAGTAAAG AGGGGGTTAT AGAGGTTAGA GTTGGTTACC CTAAGGAGAT TACAAAGAAC
CATGGGAATA AACTAACTGT GAACTTCTGG AATTATAGGC TCATTATACG AAGGTTGAAA
GAGGTTGGTG AGGAGTTGGG GATTAAGGTT ATTGAGGTTA ATGAAGCGTA CACATCTAAA
ACATGCACCC TATGCGGGGA AACTCACCCA AATGGTAGGA TTCACCGTGG CTTATTCAAG
TGTCCCCGCA TGGGGAAGGT AATTAATGCT GACTTGAATG CGGCAGTAAA CATACTACGC
ATGCACATAT CCCCAAGTCC CAGTGAGGCG GGTGTTGGGG GCTACTCCCG TGGAGGGATA
GGGGTAATTG GGTTGAAGAC CCAGCCCGTG GTCTACCGCT GGACGAACGG AGCGGGGTGG
AGGTCATCCT CCACCAGCAA TGAAGCGATG AGGATGAAGG CGGTAAACCA CAAACCAATG
AACCACCCAA AGGGAAACCC CACCCTTTAA
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| Protein sequence | MKRSNIVKLI VDEETKKRLL GLLEVYRACW NTVNWLRMQQ FKNHERVGFG ETEKETYEKF
KRILKVNAQQ VTRKNAEAWR SFFALIKEKR QNKNLKPRPP GYWKQGIILV RNDRYTIDEE
KREIYLKDFK MRLKYAGKLK WKGKQGRLEI HYDEVRGRFY AFIPMSVEDV KPKESGLKAS
IDLGIVNLVT MFIENGKWFL FKGGSILSQY EYYSKKIAIT QKKLALHGQR RSRRLSMLYR
KRSLFMRHVV NSMVRRIMNI LSKEGVIEVR VGYPKEITKN HGNKLTVNFW NYRLIIRRLK
EVGEELGIKV IEVNEAYTSK TCTLCGETHP NGRIHRGLFK CPRMGKVINA DLNAAVNILR
MHISPSPSEA GVGGYSRGGI GVIGLKTQPV VYRWTNGAGW RSSSTSNEAM RMKAVNHKPM
NHPKGNPTL
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