Gene Cmaq_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0397 
Symbol 
ID5709885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp433878 
End bp434780 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content45% 
IMG OID641274901 
Productinositol monophosphatase 
Protein accessionYP_001540233 
Protein GI159040981 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.739499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.933527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCTGC AGCTTAGCTT AGCGCCTTGT GGAAAAGCAT TAAAACGTGG AGTTGAGCCT 
ATTGCGATAA ATGTGGGTGA AGTGAATATT CAATCATTGT TAATGGATAT TGTGAAGAAC
ACATCCCCCA TGATAATTGA GAAGTCTAAG GATTCATCCT ATAAGAGGAT AATGAGGTCA
GGGAAGGGTG ATGTGACTAG GGGTATTGAT TGGGTTGCGG AGGGTGCCAT AATTGATAGA
ATTAAGGCTG AGGGATTAAG GGCACTAGTT ATTACTGAGG AGAGGGGTGT TGTTAAGGTT
AATGATGGTG AACCCGATTA CCTATTCATA GTTGACCCAA TTGACGGCTC CCTTAACTTC
GTCCTAGACG TACCCTTCTA CTCAATATCA ATAGCAGTGG CTAGGTTTAA GAGCAACCTA
ACGCTATCAG ACGTGGAGGC TGGGATTATT CACCATGTTA GCAGTGGCGT AACTTATTAT
GCTGAGAGGG GTAAGGGAGC CTTCATAAAC GGTGAACCAG CCTCCTTCGA CTCAAGCGTC
CTAGATAAGC CAGTGGCCTC AATATACATT GAGCCAACTG TTGAACAGAG GGTGTTAAAT
GGCTTGGCTG AATTATACAG GAGGCTTAAT GGCTTTAAGA TAAGGAGCCT TGGTGCAGCC
AGCCTGGAGA TAACCATGGC TGCCCTAGGG AAGCTTCTCT TCTTCCTTGA TGTTAGGAAT
AGGCTTAGGC TTTATGACAT AGCCGCAGCC TACGTTATAG CTAAGGAGCT TAACTCATTA
ATAATAGCAA TGGACGGCTA CAGTATCGAT GATGTCCCAA TCAATGAGCA ACCAAGGGTT
AGCCTACTGG TGACTAGGAG TAGGGAGGTT GCAGACCTGC TTAGGCAATT CCTCCAGCAT
TAA
 
Protein sequence
MILQLSLAPC GKALKRGVEP IAINVGEVNI QSLLMDIVKN TSPMIIEKSK DSSYKRIMRS 
GKGDVTRGID WVAEGAIIDR IKAEGLRALV ITEERGVVKV NDGEPDYLFI VDPIDGSLNF
VLDVPFYSIS IAVARFKSNL TLSDVEAGII HHVSSGVTYY AERGKGAFIN GEPASFDSSV
LDKPVASIYI EPTVEQRVLN GLAELYRRLN GFKIRSLGAA SLEITMAALG KLLFFLDVRN
RLRLYDIAAA YVIAKELNSL IIAMDGYSID DVPINEQPRV SLLVTRSREV ADLLRQFLQH