| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0394 |
|---|
| Symbol | |
|---|
| ID | 5708683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 431157 |
|---|
| End bp | 432353 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641274898 |
|---|
| Product | Fmu (Sun) domain-containing protein |
|---|
| Protein accession | YP_001540230 |
|---|
| Protein GI | 159040978 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0312752 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAAGC ATCATACTGA GGGAGGAGTT AAGATTATTG AGGTAGCTAG GGGTATTGAG
CTTGACCAAG AGGTTTACAG GCATTTGCTT CAATACATGG ATGATGGTGA ATTAGACTCC
TACTTTGAAA GCATTAGGAA GCCACCGAGA AGATACTACG TTAGGGTTAA TACACTGAAG
GTGAGTACCG ATGAATTACT AAGGAGGCTT AAGGAACATG GCATAACCGC TTACAGGGAT
GAGGTACTTG ATGAGGCCAT ATGGCTCCCA ACGGAGGGAC CTAATAGGGT TGGGGCTAGT
AGGAGGTATG TTGTTGCTGA TAAGTACGCC TCAGAGAGCG TTTACCTAGG CTCCAACCTA
TACGGCCCAG GGGTACTCTA CATGCCTAAT GACATTCATG CCGGTGATGA AGTCAACGTA
GTATCCCCAA ATGGTGACGT AGTTGCCTTA GGGGTCGCTA AAATTAATGC ATCAGAATTC
AGGAGGGGGT TCAGGGGTAT TGTTGTTGAA ACCACTGAGT CAGTTTATAG GTTACCTAAG
TTAAGGGATC TTGATGAGTG GAGGTTCGGC TTATTCTATG AACAGTCCCT GCCGGCTCAA
TGGGTTGGTA GATTAATTGA CCCAGGGCCT AATGAAACCA TTATAGACCT ATGCTCGGCA
CCAGGTGGTA AGGCAACCCA CGTGGCTCAA TTATCCGGTA ATAAGGCAAT CATCATTGCG
GTTGATAGGA GTTGGAGTAA GGTTAGGCAA ATTGAGGGTA ATGCAGCTAG ACTGGGGGTT
AGGTTAATGA CTTACATTGA GGATAGTAGG TTCCTTCACT TAAACCACCC TGAGTTTATT
GGTAAGGCTG ATAAAGTCCT CATTGACCCA CCCTGCAGTG ACGCTGGGGT TAGGCCTAAA
CTATACTATA GGTTAACCAT GACTGACTTA ATCAACCTAG TGGCCTACCA GAGGCAGTTC
ATTAAGGTTG CCTACAGTTT ACTTAAGCCT AATGGATCAT TAATATACTC CACATGTACG
TTACCACCAA TGGAGAATGA GGATAATGTT AAATGGGCCA CTGAGTTAGG CTTCAGGCTA
GAGTACGTTA ACGTACCTGC CGGTCAGAGG GCGTTTGACG GAGTCTCAAG GAGGTTTCAC
CCACATATCC AAGATACACC AGGCTTCTTC ATGGCTAAGT TAACTAAATT ACCCTAG
|
|---|
| Protein sequence | MPKHHTEGGV KIIEVARGIE LDQEVYRHLL QYMDDGELDS YFESIRKPPR RYYVRVNTLK
VSTDELLRRL KEHGITAYRD EVLDEAIWLP TEGPNRVGAS RRYVVADKYA SESVYLGSNL
YGPGVLYMPN DIHAGDEVNV VSPNGDVVAL GVAKINASEF RRGFRGIVVE TTESVYRLPK
LRDLDEWRFG LFYEQSLPAQ WVGRLIDPGP NETIIDLCSA PGGKATHVAQ LSGNKAIIIA
VDRSWSKVRQ IEGNAARLGV RLMTYIEDSR FLHLNHPEFI GKADKVLIDP PCSDAGVRPK
LYYRLTMTDL INLVAYQRQF IKVAYSLLKP NGSLIYSTCT LPPMENEDNV KWATELGFRL
EYVNVPAGQR AFDGVSRRFH PHIQDTPGFF MAKLTKLP
|
|---|
| |