| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0389 |
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| Symbol | |
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| ID | 5708883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 425005 |
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| End bp | 427437 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641274893 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001540225 |
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| Protein GI | 159040973 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000267846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAGTA AAACTTTTAT ACCTTGGGCG ATCATGCATG AACTCAGATC AAATATGAAT
AGGAATGCAG TTAAGTACGT ATTAATAATA TCAATAGCAG TGATGGTAAT ATTCAATGTT
GTAACTTATG CAGCATCAGC ACCACAACTT ATTAATGCAA TCCCAAGTAC GCTTATATAT
ACCCCTGGAA TACCTGTATA CAATCCTTAT GTACCCAGTA ATCTACTGGG TTCTGTTAGT
ACGTGGCTTC CCTTGGCGTT CTATAATCCA TTTACTGGTC AATTCTGGCC TATTCTTGCT
GAGAATTGGA CTATTCAAGT TCTCCCTAAT GGATCAGGTA TTTTGACTAT TTATCTTAGG
CCTGGCTTAT ACTGGTTTAA TGGTTCAGCG GTAATGCCTT TCACGGCATG GGACGTGTAC
GCACAGTACT ATATTGCTGT TAAGGCGTTT AGCTGGTATT GGCCATACAT GCAGCCTCAG
TACGCTGATG ATGATGTTAG AGTAATCAAT AATTACACTA TTCAATTCCT ATTCCAGAAA
TGGAGCCCAA CAGAGTGGAT ATACTTGATC ACAGGTATGA TTGAAACACC ATACCCTGTA
TGGAAACCAA TAGTGGATGC ATTAAAGGCA ATGAACACCA GTGAGGCTTA TACCTTTGGA
CAGAAGAATA TAACGGAGTA TGCACCACCT TATTGGGGCT TAAATCCATA CTACTTAACG
TACATAAGTC CAACATATAT TGATGTTGCA TTGGAGCCTG ATTACTTTAA TGGCGTTCCA
TTACTAGCTA CTTGGAGTAA AGTATTCCCA TTCCATGCTT GGCAATACTA TAACCCAACA
TTAATAGCAT TCTTCCTCGG CGGTAATACT CAGGCAATGA GTGCCTTCCT CGCCGGTAAG
GTTACATGGG GTGGTGTAGC ATTATCAGAG CAGCAGGTTG CTGTTCTTAA TAAGAGCGGT
GTAGGCGTAT ACCTATGGCC TGACTATACT GCCTTTGGAA TAGCAGTAGA GCCTAATACT
TACCCATGGA ATATTCCTCA GGTTAGGGAG GCCTTATGTG ATGTTATTAA TAGGAGTACA
GTTGTGGCTG CATGGGGATT AAACTACCCA GATTACTATC CAGAACCCAT AGAACCATAC
ATTGTTAATG AGTTTCCATC CAGCATTAGG CAGTTCCTAA TACCATGCTC ATATAATACA
AGTGAGGCTG TTAAAATCCT TGAGTCATAC GGCTTAACCT ATAAGCATGG TCAATGGTAT
CTACCCAATG CAACACCACT AACACTAACA ATAATCGGCC CCTCTGGTGA GACTGATTGG
ATGACCATGA TTAGTGTGGC TGCTGAGCAA TTATCAGAAT TCGGCATTAA AACAAGCCTA
ATAGGGCAGG ATACTGGTGT ATTTTGGAGT TCTACCTTCT CCAGTGGTGA GTATGAGGCT
GCTATTATGT GGGTGACATA TCACCTTGAA TCATACTACT CAGCTTGGTC ATTCTTAAGT
TGGCCATTCT GGGCCATCTC AACATTTAAT ACATCTAAAG CGTGGCTATT CCAGTGGCCT
AATGGAACAT GCACACCAGT GAATATGCCG TATATTCACA ATCCATATGG TGATATACCA
ACGCTTAACG CGACCATTGT CTGGTGCATT AACTCAACAT CCGGCTACAT TAACTTAACT
AATTGGGCCT GGGCATTCGA TCAAGCCTAC CCAGGTACAT CAGACTACGA TACATTAATA
GAAGTTATCT TCGCATGGTA TCACTACTGG GTACCAGTAA TGCCAATTGG ATACAAGATT
CAATCACTTG AGTACGCTAA GAATGCCATG GATCCATTAT GGTTGTATCA ACCATACATA
CTCAATAACT ACCCATGGTT AGTTGCATTA TCAATACCAT ACTACACAGT ATGGGGCTTT
ACCACCGGGT GGTCTCCAAT GGGCTTTGCG CCAATGGTTA TTCTAGGCCT TGTAACACCA
CCTGGTACTG TACCCCCCAT TGCTCAAGCT ATAGCTAATG GTAGTCTTTG GACTAATCCG
TATCTGCATC AGTGGGCTGT CTTCATTGGT TTACCTACTC CTGATCCTAC TCTGCAGGAG
GTTGTGGCAT CGTACTTCCA TATACCGTAT ACTCCAGTAT CAACCACTAC TTCAACCACA
ACCACTACGA CTACTACACC AGTGACTACT ACTTCAACGA CTACTTCAAC AACAACTAGT
ACCGTTACCT CAACCACTAC TGCCGTTAGC ACTGTTACAA GCACAGTAAC CAGTACAGCA
GTATCAACAG TGACTAGCAC AGCAACAACC ACAGCCGTAT CCACAGTAAC AGTCACAAAA
CCAGTAATAT CAACAGCACT AATAGCAGGA ATAGTAATAA TAGTAATAGT CATAGCAGTA
GTGGCTGCTG TAATAGCATT AAGAAGAAGA TGA
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| Protein sequence | MYSKTFIPWA IMHELRSNMN RNAVKYVLII SIAVMVIFNV VTYAASAPQL INAIPSTLIY
TPGIPVYNPY VPSNLLGSVS TWLPLAFYNP FTGQFWPILA ENWTIQVLPN GSGILTIYLR
PGLYWFNGSA VMPFTAWDVY AQYYIAVKAF SWYWPYMQPQ YADDDVRVIN NYTIQFLFQK
WSPTEWIYLI TGMIETPYPV WKPIVDALKA MNTSEAYTFG QKNITEYAPP YWGLNPYYLT
YISPTYIDVA LEPDYFNGVP LLATWSKVFP FHAWQYYNPT LIAFFLGGNT QAMSAFLAGK
VTWGGVALSE QQVAVLNKSG VGVYLWPDYT AFGIAVEPNT YPWNIPQVRE ALCDVINRST
VVAAWGLNYP DYYPEPIEPY IVNEFPSSIR QFLIPCSYNT SEAVKILESY GLTYKHGQWY
LPNATPLTLT IIGPSGETDW MTMISVAAEQ LSEFGIKTSL IGQDTGVFWS STFSSGEYEA
AIMWVTYHLE SYYSAWSFLS WPFWAISTFN TSKAWLFQWP NGTCTPVNMP YIHNPYGDIP
TLNATIVWCI NSTSGYINLT NWAWAFDQAY PGTSDYDTLI EVIFAWYHYW VPVMPIGYKI
QSLEYAKNAM DPLWLYQPYI LNNYPWLVAL SIPYYTVWGF TTGWSPMGFA PMVILGLVTP
PGTVPPIAQA IANGSLWTNP YLHQWAVFIG LPTPDPTLQE VVASYFHIPY TPVSTTTSTT
TTTTTTPVTT TSTTTSTTTS TVTSTTTAVS TVTSTVTSTA VSTVTSTATT TAVSTVTVTK
PVISTALIAG IVIIVIVIAV VAAVIALRRR
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