Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0382 |
Symbol | |
ID | 5708581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 415766 |
End bp | 417832 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641274885 |
Product | MCM family protein |
Protein accession | YP_001540218 |
Protein GI | 159040966 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1241] Predicted ATPase involved in replication control, Cdc46/Mcm family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.324163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.752457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATG AGGAATTACT TCAACTGAGT AGGGATGAGT TGATTAATAG GGTTGAGAAG TTTCTGAGAC AGGTTGAGAA GTATGATGAG GAGTTAAGCC TAGTAATAGT GAATAGGAGG AGGTCACTTG TAGTGGATTT CAATGATCTC CTACTCTACG ATAAGCAGTT AGCCGACTAC CTAATTGAGA AGCCTGATTT AGTGATTGAA AGCGCCTCAG AGGCCGTTGG TAGATTAATA GAGGAAAAGG ACCCTGAGTA CGCTAGGCTT GTTCAAAGAT TCCACGCCAG GTTTAGGTTA AGCCCAATGG AGAGGATGAG CATTAGGAGG CTTAGGAGCG AACACTTGGG TAGATTCGTC TCAATTGAGG GTATTGTGCT TAGGCAGACA CCGCCAATGC ACTACGTTAA GATGGCTAAG TTCAGGTGTA ATCAATGCGG ATACGAGGTA ACGGTAACCA CGGACACCTA TAATTCACTT CAACCACCTA AGAAATGCCC CCAATGCGGT GCAGTGAACT CAATGGTATT CGTAACTGAG GAATCAGTGA TAACTGATTG GCAGAAGATA CTTGTTCAAG AGAAGCCTGA GGAAACCCCC TCAGGTCAAT TACCGAGGAG TATTGAGGCT GTCTTAACCG ATGACTTAGT TGACACAGTT AAGCCTGGTG ATAGGGTTAT GTTGAGTGGG GTACTTGAGA TAAATCTGTT TGAACCAAGG AGGGGTAAGT TACCTGTGTT CTCAAGGTTA ATTAACGTTA ATTACATTGA GAGCCTACAG AAGGAGTTCG CTGAAATAGA GATAACCCCC CAGGATGAGC AGGAGATAAG GAAGCTAGCC ATGCTTCCAG ACGTTAAGGA GAGGATTATT GCATCAATAG CACCCTCAAT TTATGGTCTT GATGACGTTA AGGAGGCTAT AGCCTGTCTA CTCTTCGGTG GTGTGCCTAA GGAACTACCT GATGGGACTA GGATAAGGGG TGATGTCCAT GTTCTACTGG TTGGTGACCC AGGTACGGCT AAGTCGCAGC TGCTTAAGTA CGTGGCCAGG ATAGCGCCAA GAGCAGTCTA CACCACTGGT AAGGGATCCA CTGCGGCTGG TTTAACAGCG GCTGTGGTTA GGGATGGGTT AACCGGTGAA TTTTACCTAG AGGCTGGTGC ATTAGTCTTG GCTGATATGG GGGTTGCTGT GGTTGATGAG ATTGATAAGA TGGATGCTAA GGATAGGGTT GCTATGCATG AGGCCATGGA GCAGCAGACC GTCTCAATAG CTAAAGCCGG CATATTAGCC ACACTTAACG CTAGGGCAAG CGTCCTAGCC GCCTCAAACC CAGCCTTCGG TAGATACCTA CCCAATAGGA CTGTGGCTGA GAACGTTGAC TTACCCGTAA CCCTATTGTC TAGGTTTGAT TTAATATTCA TAATTAGGGA TGAACCCAAT ATTGATAGGG ATAGGACTGT GGCTGAGCAT GTGGCTAAGC TACACTCAGG TGAGTTGACT CAAGGCTTCA GGAACATGAT TAGGGTTGAC TTACTTAGGA AGTACATTGC CTACGCCAGG AAGTACATTA AACCAGTCCT AACCCCTGAG GCTAAGGATA GGATAGTGGG CTTCTACACC CAAATGAGGG CTAAGTCAAC CCAAGAGGCT GGTTCACCAG TGGCCATTAC AGCTAGGCAA CTTGAGGCAT TGATTAGGTT AACTGAGGCT GAGGCTAAGA TGAGGCTAAG CAGCATAGCC ACCGCTGAGG ACGCTGAGAG GGCTATTAGG TTATTCATGA GGTTCCTGCA GAGTGTTGGC ATTGATATGG AGACAGGTAA CATTGATATT GACGTAATCA TGACTGGTAA ACCCAGGAGT CAGCAGGAGA AGATTGCACT ATTAATGAGT CTAATAGCTA AGCTTGAGGA GATTAATAAT AATAAGCCAA TCAAGGTTGA GGAACTTTAC AGGGAGGCTG AGAACGAGGG GCTTGATAGG GCTACAGTGG ATAAGATACT GAGTATACTT AAGAGTAATG GGGAAATATA TACACCTAAG CAGGGTTACA TTAAGAGAAC CGTTTAA
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Protein sequence | MSNEELLQLS RDELINRVEK FLRQVEKYDE ELSLVIVNRR RSLVVDFNDL LLYDKQLADY LIEKPDLVIE SASEAVGRLI EEKDPEYARL VQRFHARFRL SPMERMSIRR LRSEHLGRFV SIEGIVLRQT PPMHYVKMAK FRCNQCGYEV TVTTDTYNSL QPPKKCPQCG AVNSMVFVTE ESVITDWQKI LVQEKPEETP SGQLPRSIEA VLTDDLVDTV KPGDRVMLSG VLEINLFEPR RGKLPVFSRL INVNYIESLQ KEFAEIEITP QDEQEIRKLA MLPDVKERII ASIAPSIYGL DDVKEAIACL LFGGVPKELP DGTRIRGDVH VLLVGDPGTA KSQLLKYVAR IAPRAVYTTG KGSTAAGLTA AVVRDGLTGE FYLEAGALVL ADMGVAVVDE IDKMDAKDRV AMHEAMEQQT VSIAKAGILA TLNARASVLA ASNPAFGRYL PNRTVAENVD LPVTLLSRFD LIFIIRDEPN IDRDRTVAEH VAKLHSGELT QGFRNMIRVD LLRKYIAYAR KYIKPVLTPE AKDRIVGFYT QMRAKSTQEA GSPVAITARQ LEALIRLTEA EAKMRLSSIA TAEDAERAIR LFMRFLQSVG IDMETGNIDI DVIMTGKPRS QQEKIALLMS LIAKLEEINN NKPIKVEELY REAENEGLDR ATVDKILSIL KSNGEIYTPK QGYIKRTV
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