Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0376 |
Symbol | |
ID | 5710244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 410710 |
End bp | 411246 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641274878 |
Product | hypothetical protein |
Protein accession | YP_001540212 |
Protein GI | 159040960 |
COG category | [S] Function unknown |
COG ID | [COG2410] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0315888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.858697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGAGC CAGCAGAGGC AGTGAAGCTT GGTGGTGTTG ACTTATCAGT GAAGAGGGTG AGTGGGGTAG CTGAGGTTAA TGATGGGGTA CTGGTTAGTA GGCTTGTTGA GAGTGATGAT GAGGTAATTA ATGAGTTGAA TGATGCATCA GTGGTGGCTA TTGATGCACC ACTTAGTGGG GTAGGTAAGT ATAGGGATGT TGATAGACTC ATGCTTAAGA TGGGGCTTAA GGTTATGCCA GCTAACTGGA GGTGGATGAT TAAGTTAAGT GAGAGGGCTA TTCGAATTAA GGGTAGGCTT GAGGAATTGG GTATTAGGGT CATTGAAACT CACCCATGGA GTGTACTTCA CTGGCTTAAC ATGGATTTAA CTCAATTATC CAGTAAATTA GGGGTGAGGA AGCTGGTTAT TAATGGAGGT AAGGATGCCT ATGATGCTGC CGTATGCGCC TTAGTTGCAT TGGCGTATGT AATGGGTAAG GTTAGGAGGG TTACCGCTAA TGATGGTGAA TTATACTTAA TAAGTGTTGA GGATTAG
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Protein sequence | MSEPAEAVKL GGVDLSVKRV SGVAEVNDGV LVSRLVESDD EVINELNDAS VVAIDAPLSG VGKYRDVDRL MLKMGLKVMP ANWRWMIKLS ERAIRIKGRL EELGIRVIET HPWSVLHWLN MDLTQLSSKL GVRKLVINGG KDAYDAAVCA LVALAYVMGK VRRVTANDGE LYLISVED
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