Gene Cmaq_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0376 
Symbol 
ID5710244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp410710 
End bp411246 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content44% 
IMG OID641274878 
Producthypothetical protein 
Protein accessionYP_001540212 
Protein GI159040960 
COG category[S] Function unknown 
COG ID[COG2410] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0315888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.858697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGAGC CAGCAGAGGC AGTGAAGCTT GGTGGTGTTG ACTTATCAGT GAAGAGGGTG 
AGTGGGGTAG CTGAGGTTAA TGATGGGGTA CTGGTTAGTA GGCTTGTTGA GAGTGATGAT
GAGGTAATTA ATGAGTTGAA TGATGCATCA GTGGTGGCTA TTGATGCACC ACTTAGTGGG
GTAGGTAAGT ATAGGGATGT TGATAGACTC ATGCTTAAGA TGGGGCTTAA GGTTATGCCA
GCTAACTGGA GGTGGATGAT TAAGTTAAGT GAGAGGGCTA TTCGAATTAA GGGTAGGCTT
GAGGAATTGG GTATTAGGGT CATTGAAACT CACCCATGGA GTGTACTTCA CTGGCTTAAC
ATGGATTTAA CTCAATTATC CAGTAAATTA GGGGTGAGGA AGCTGGTTAT TAATGGAGGT
AAGGATGCCT ATGATGCTGC CGTATGCGCC TTAGTTGCAT TGGCGTATGT AATGGGTAAG
GTTAGGAGGG TTACCGCTAA TGATGGTGAA TTATACTTAA TAAGTGTTGA GGATTAG
 
Protein sequence
MSEPAEAVKL GGVDLSVKRV SGVAEVNDGV LVSRLVESDD EVINELNDAS VVAIDAPLSG 
VGKYRDVDRL MLKMGLKVMP ANWRWMIKLS ERAIRIKGRL EELGIRVIET HPWSVLHWLN
MDLTQLSSKL GVRKLVINGG KDAYDAAVCA LVALAYVMGK VRRVTANDGE LYLISVED