Gene Cmaq_0364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0364 
Symbol 
ID5708927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp401626 
End bp402630 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content45% 
IMG OID641274866 
Productdaunorubicin resistance ABC transporter ATPase subunit 
Protein accessionYP_001540200 
Protein GI159040948 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAG ATTCAGCCAT AAAGGCTATA AACCTGACTA AGCGTTATGG CCCAATATTA 
GCCGTGGATC ACATTAACTT CGATGTAAAG TACGGTGAGG TTTTCGGTTT CCTAGGCCCC
AATGGTGCTG GTAAGACAAC CACCATAAAG ATGCTGACCA CCGTGACTAG GCCCACTGAA
GGTACTGCAT TAGTGAATGG TTACGATATT GTTAAGCAAC CTGCCAAGGT AAGGGAATCA
ATTGGTGTTG TTCCCCAGGA GTACACTAGT GATGAGGATT TAACAGGTTG GGAGAACCTA
ATGCTAATAG CTAGTCTCTA CGGGATACCT AAGAAGGAGG CTAAGGAGAG GGCTACTGAG
TTACTTAACC TAGTTGAATT ATCCCACGCA GCGGATAGGA AGGTTGAAAC ATACTCCGGT
GGTATGAGGA GAAGGCTTGA GATAGCCATG GGTCTAATTA ATACACCTAA AATACTGTTC
CTCGATGAAC CAACACTAGG TCTTGATGCA CAGACTAGGG CAGCAATATG GTCATATGTC
TATAAGCTTA AGGAGCAATT GGGTACGACA ATATTCGTCA CCACCCACTA CCTTGAGGAG
GCTGACCAGT ACTGTGATAG GATAGCCATA ATTGATCACG GTAAGATACT TGCCATGGGG
ACGCCTAGGG ACTTAAAGGA GAGTATTGGT GGTGATGTTG TTTCGATACA GGTCGCTGGT
AATCCTGAAC TTGCGGTTAA GGTGCTTCAA GGTGTTGATG GTTTAAGTGA TGTTAGGGTT
GTTGAGGGTT ACGTTAGGTT TAAGGTTAAG GATGGGAGCA GAGCTGTGCC TGTAATCTTC
GATATATTGA GTAAGGCTGG GATTAGGGTA ATGAGTATAT CTATTAAGGA GCCGTCAATG
GATGAGGTCT TCATGGAGTA CACGGGCCAT AGTCTAAGGG ATGAGTGGGG TAGTAGGGAG
GAGGCTATGG CCATGAGGAG GATTATAAGT ACTGCCAGGA GGTGA
 
Protein sequence
MSSDSAIKAI NLTKRYGPIL AVDHINFDVK YGEVFGFLGP NGAGKTTTIK MLTTVTRPTE 
GTALVNGYDI VKQPAKVRES IGVVPQEYTS DEDLTGWENL MLIASLYGIP KKEAKERATE
LLNLVELSHA ADRKVETYSG GMRRRLEIAM GLINTPKILF LDEPTLGLDA QTRAAIWSYV
YKLKEQLGTT IFVTTHYLEE ADQYCDRIAI IDHGKILAMG TPRDLKESIG GDVVSIQVAG
NPELAVKVLQ GVDGLSDVRV VEGYVRFKVK DGSRAVPVIF DILSKAGIRV MSISIKEPSM
DEVFMEYTGH SLRDEWGSRE EAMAMRRIIS TARR