| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0360 |
|---|
| Symbol | |
|---|
| ID | 5708514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 398197 |
|---|
| End bp | 398856 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641274862 |
|---|
| Product | AMMECR1 domain-containing protein |
|---|
| Protein accession | YP_001540196 |
|---|
| Protein GI | 159040944 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2078] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00296] uncharacterized protein, PH0010 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTAAGC CGTATAACCT TGAACAGGGA AAATTCCTAG TTAGGTTAGC TAGAAGGGCG
GTGGAGGAGT TCATAAGAAG TAAGCGTATT ATAAAGCCAC CTGAGGATAC GCCCAGTAGG
CTGCTTGAGG ATAATTACGG GGTCTTCACA ACTATAGAAA CCATTAGGGA GGATGGATCA
ACTGAATTAA GGGGATGCAT AGGTTTCCCA AGGGGTAATG TTAATACGGT TAAGGCTACT
ATAAACAGTG CCCTAGCCGC TGCCTTTGAT GACCCAAGGT TTGCGCCACT TGATGTTAAT
GAACTTGAGT CCGTGATATT TGAAGTAAGT GTATTAAGTC CCCTTGAGGA GGCTAAGTTT
AATTCCCCTA AGGAATTAGT TAACTTAGTT AAGGTTGGTG TCCACGGCTT AGTAATAGAG
AGGGGGATGT ATAGTGGGTT GCTTCTTCCT CAAGTACCCG TTGAGTACTG TTGGGATACA
GTAATGTTCC TTGATGAGGC TTGTGAGAAG GCTTACCTAA GGCCTGAGTG CTGGGCTGAG
AAGGGTACTA GGGTTTACAC CTATGAGGCT CAAATATTTA GGGAAAAGGG GCCTAGGGGG
GATGTTTATG AAAGGGATCT TATTGAGGAA TTAAAGAAGT GTCACCTTGA TGAGGCATAA
|
|---|
| Protein sequence | MFKPYNLEQG KFLVRLARRA VEEFIRSKRI IKPPEDTPSR LLEDNYGVFT TIETIREDGS
TELRGCIGFP RGNVNTVKAT INSALAAAFD DPRFAPLDVN ELESVIFEVS VLSPLEEAKF
NSPKELVNLV KVGVHGLVIE RGMYSGLLLP QVPVEYCWDT VMFLDEACEK AYLRPECWAE
KGTRVYTYEA QIFREKGPRG DVYERDLIEE LKKCHLDEA
|
|---|
| |