| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0350 |
|---|
| Symbol | |
|---|
| ID | 5709618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 390321 |
|---|
| End bp | 391262 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641274852 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001540186 |
|---|
| Protein GI | 159040934 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGATT GGTTAAGGGG ACTTAGGGCA ATTATGGTTA GGAGCCTAAA CTACAATAAG
TTACCCATAC CCGTTGAGAG AAGCGTATGC AGTGAATGGG TTAATGGAGT GAATATTCCT
GAATCAGGAG ACACATTACT CTACACCTCA TGCCTCTACC AACTCGTACC ATACATAAAC
GCATTCACGG GCCTAATGGA GAAGGCGTCG CCTGAATCAT TAGGCCCCCT AGTCAGTAGG
TTTAGTGGCG CGGTTATCAC TATGGCTAGG GTTATTTTAA AGCCACCTAG AAGTGAGATT
GATAGGGTTA ATGGGATTGT TAAATCCATC GCTAACCTAC TCATTAAGAA TGGTGTTGAA
TTCACCTTCA TGCCTGATGA ACCCTACTCA GGGGCGTTAC TATATGAGTT GGGGTTTGAG
GATGACTTCA AGGACTACTT CTCATCAATT GTACTTAATT ACTTTAAGAG TAAGGGAATT
AAGACAGTTA TAACCATTGA TCCGCACACT CACCATATAT TAACGGTAGT GGCCCCTAGA
TTCTTCGGGG ATCTGGGTAT TAGGGTTGTG AATTACATGG AGTTAATTAA GGGTGTTGAT
AAGGCTAAGT TGAGTAGAGT GGTTATTCAT GATTCATGCC TATACTCAAG GTACCTCGGT
ATGAGGGAAA CCTACAGGAG ATTACTGGAG CAGGCTGGGG TTGAGCATGT TGAGGATCCC
TACGTAACAG GGATTTCAAC ATCAATGTGC TGCGGTGGTC CGGTGGAATC CATTAAACCA
TCATTATCAA ATAAGGTTGC TAGAAACAGG GTTGAATCAT TATCCAGGTT GTCAAATAAT
GTAGTTGTGG CTTGCCCAAT ATGCTACGCT AACCTATCCA GGAACAGTAA CGGTAGGGTT
AAGATACTTG ACTTAGCTGA GGTACTAAGT GGTGCTCAGT AG
|
|---|
| Protein sequence | MEDWLRGLRA IMVRSLNYNK LPIPVERSVC SEWVNGVNIP ESGDTLLYTS CLYQLVPYIN
AFTGLMEKAS PESLGPLVSR FSGAVITMAR VILKPPRSEI DRVNGIVKSI ANLLIKNGVE
FTFMPDEPYS GALLYELGFE DDFKDYFSSI VLNYFKSKGI KTVITIDPHT HHILTVVAPR
FFGDLGIRVV NYMELIKGVD KAKLSRVVIH DSCLYSRYLG MRETYRRLLE QAGVEHVEDP
YVTGISTSMC CGGPVESIKP SLSNKVARNR VESLSRLSNN VVVACPICYA NLSRNSNGRV
KILDLAEVLS GAQ
|
|---|
| |