Gene Cmaq_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0344 
Symbol 
ID5709888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp384599 
End bp385111 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content46% 
IMG OID641274846 
Producthypothetical protein 
Protein accessionYP_001540180 
Protein GI159040928 
COG category[S] Function unknown 
COG ID[COG4755] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGGC AAAGGTTTAA ATATAGCGGT TATGTAGTAG AATCAGTGTT AAACATGAGC 
GTGGAGAGTC AGGTTAAGGC TCACATAAAG GGATTAATAA ATAGACTTGA TGGCTGGTTA
ATAAGCCAAA GGAAACTAAT AGATGATTTA CAGAAGTACG CAGACTACGT TAAGAGCCAG
GATAGGTACA CTTTACTGCT CTCGGCTCAG GCCATGATAT ACTACATAGA GCGTACCGCT
AAGGACTTTG AGTCATGGTT AAACAACCCC CTCATAACCT CAATAATGAC GCCGGATATG
TTGAAGGAAC TTGAGGCTAA GCTGCGTGAA CTGGCTGTTA ACTTCATAAA GATTGACCTT
GAGCACACTG GGCAGTACCT TGACTTACTG AAGAAGTATG ATGCGGCTGG TGAGGTACCG
GAGATACTGA GACTGTACTT TGAGCATAGG ATTGGTGGCG CACAGGAGGG TGGGCAGCAG
AGGGGAGGGG AGGAGATGCC TAGGTTCCTG TGA
 
Protein sequence
MLGQRFKYSG YVVESVLNMS VESQVKAHIK GLINRLDGWL ISQRKLIDDL QKYADYVKSQ 
DRYTLLLSAQ AMIYYIERTA KDFESWLNNP LITSIMTPDM LKELEAKLRE LAVNFIKIDL
EHTGQYLDLL KKYDAAGEVP EILRLYFEHR IGGAQEGGQQ RGGEEMPRFL