Gene Cmaq_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0342 
Symbol 
ID5709421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp382191 
End bp383624 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content49% 
IMG OID641274844 
ProductV-type ATP synthase subunit B 
Protein accessionYP_001540178 
Protein GI159040926 
COG category[C] Energy production and conversion 
COG ID[COG1156] Archaeal/vacuolar-type H+-ATPase subunit B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGC TTCTTGAGAT TAGGGGGATA CAGGAGTATA GGACTGTTAG GGAGGTTAAG 
GGGCCTTTAA TAGTTATTGA GAGGACTAAG GGGATATCCT ACGGTGAAAT GGGTGTTGTA
ACTGGGCCTG ATGGTGAACC CAGGCTTATT CAAGTCATAG AGGTTGGACC TGACTACGCC
ATAGCCCAAG TCCTAACGGG CACATTAGGC TTACCGGCAA GTGGCTCAAC GGTTAGATTC
TATGGAACCA CCCTAAGGCT TCCGGTATCA GAGGATTTAC TGGGTAGGAT AATTAGCGGT
AGGGGTGTGC CTAGGGATTC ATTATCAATG CCTCCCGCGG AGGATTTCCT TGATGTTAAC
GGTGAACCAC TTAACCCATA CGCCAGGGAT TACCCGGAGG AACCCATTGA GACCGGTGTT
AGTGCAATAG ATGGACTCTA CACCATGGTT AGGGGGCAGA AGTTACCCAT ATTCTCAGGC
ACTGGACTGC CCCATAATAT GCTTGCAGCC CAAGTTGCTA GACAAGCCAC GGTTAGGGGT
AGTGAGGAGG AGTTCGCAAT AGTCTTCGCG GCCATTGGGC TTAGGACCGA GGAGGCTTTA
TTCTTCATTG ATGAGTTCAG GAGGACTGGT GCCTTGAGGA GGCTGGTACT GGTAATGAAC
CTGGCCAGTG ACCCAATAGC TGAGAGGATA CTCACGCCTA GGGTTGCCTT AACCATAGCC
GAGTACTTGG CTTGGCAAAG GGATTACCAT GTGTTAGTTA TTCTAAGTGA CATGCTTAAT
TACGCTGAGG CACTTAGGGA GCTTTCATCA GCCAAGGGTG AATTACCCGG TAGGAGGGGT
TACCCAGGCT ACATGTACAC TGATTTAGCC TCAATATTCG AGAGGGCTGG TAGGGCTAGG
GGTAGGAAGG GTAGTGTTAC TCAATTCCCA ATATTAACAA TGCCTCACGA CGACATAACC
CACCCAGTAC CAGACTTAAC AGGCTACATT ACAGAGGGTC AATTAGTCCT ATCAAGGTCA
ATGTGGGGTA AGGGTATTTA CCCACCGTTC GATGTTTTAA TGAGCCTATC AAGGCTTATG
AAGGACGCCG TGGGTGAGGG GAAGACTAGG GATGATCATA AGTACGTGGC TAACCAATTA
ATATCAGCAT ACTCAAGGGC CCTTGACGTC AGGAACCTAG CAGTACTGGT TGGTGAGGGT
AATTTAAGTT GGCGTGAAAG GAGGTACCTC AGGTTCGCTG ATGAGTTTGA GAGGAGGTTC
ATAGCCCAGG GCTTCTATGA GAGGAGAACC TTCGAACAGA CGCTGGATAT AGCCTGGGAT
GCCTTAAGCA TTCTCCCAGA TGATGAATTC TCCAACATAC CACCGGAGGT GTCTAAGAGG
TATTATAGGG AGGGGGTGTT TAAGTCGATT AAGGATGAGG GGGTTAAGGC TTAA
 
Protein sequence
MSKLLEIRGI QEYRTVREVK GPLIVIERTK GISYGEMGVV TGPDGEPRLI QVIEVGPDYA 
IAQVLTGTLG LPASGSTVRF YGTTLRLPVS EDLLGRIISG RGVPRDSLSM PPAEDFLDVN
GEPLNPYARD YPEEPIETGV SAIDGLYTMV RGQKLPIFSG TGLPHNMLAA QVARQATVRG
SEEEFAIVFA AIGLRTEEAL FFIDEFRRTG ALRRLVLVMN LASDPIAERI LTPRVALTIA
EYLAWQRDYH VLVILSDMLN YAEALRELSS AKGELPGRRG YPGYMYTDLA SIFERAGRAR
GRKGSVTQFP ILTMPHDDIT HPVPDLTGYI TEGQLVLSRS MWGKGIYPPF DVLMSLSRLM
KDAVGEGKTR DDHKYVANQL ISAYSRALDV RNLAVLVGEG NLSWRERRYL RFADEFERRF
IAQGFYERRT FEQTLDIAWD ALSILPDDEF SNIPPEVSKR YYREGVFKSI KDEGVKA