Gene Cmaq_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0338 
Symbol 
ID5710478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp377067 
End bp378929 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content45% 
IMG OID641274840 
Productaldehyde ferredoxin oxidoreductase 
Protein accessionYP_001540174 
Protein GI159040922 
COG category[C] Energy production and conversion 
COG ID[COG2414] Aldehyde:ferredoxin oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.124472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTT TCAGAATACT CAGGGTAAAT TTATCAACCG AGACCTTTAA TGAGGAGGTT 
GTTAAAGATG ATTTACTGAA ATCATTCCTA GGTGGTAGGG GTTTAGCGGC GTACTACGCC
TTTAAGGAGA TACCAAGGGG CATTGACCCC CTTGACCCCA GTAATAAGCT TTACATTTTC
TCAGGCCCAC TCAGTGGAGT CGCCACCTTA TCCACAAGTA GGGTTAACGT TACCACAAGG
TCCGTGTTGA ACGGTGTCTA CACGCACTCT AATGCCGGCG GCAACTTCTC CTACTGGTTA
AGGAGATCTG GTTACGATGG GATAATTATT GAGGGTAAGG CTGAGGAACC AGTCTACCTA
GTGGTTAAGA ATGGGGAACC ATCATTAAAG CCTGCTAAAC ATATTTGGGG CAAGTGGACT
GGCTCAGCCA CTAAAATAAT CCTAACTGAG AATGGATTCC CACCTGATGA AACTAAGGCC
GGTGTAGCCG TAATAGGCCC CGCTGGTGAA AACCTGGTGA AGTTCGCTGG TATCAGGTTC
TCAGACTATG AGAGATTCGC AGGACGTGGT GGGGTGGGGG CTGTTATGGG TAGTAAGAGG
CTTAAAGGCA TACTAGTGTG GGGGACGAGG GATCTGTATA GGGAATTGGT TGATAAGAAT
GCATTCATGA AGGTTAATAA TGAGATTGTG AAGAGACTTG TAACACATGA TACAACTAAG
GCTCTACACG CCTACGGTAC CAATGTCCTC ATGAATCTTG TTCAAGCCGT TGGAGGCCTA
CCCCATTATA ATTTCGCAGG TACCGGGTTG ATTAAGAATG TTGATGATGT TAGCGGTGAG
TTAATTAAGA GTAAGTACGT TGTGGAGACC CACGGTTGCT TCAATTGCCC AATAGCCTGC
ACTCAAATAA CAATGGTTAA GAGCGGCCCA TTTAAGGTTC CTGGTGAGAA AATTAAGTAC
GAGTATGAGA ATACCTGGGC ACTGGGACCT AACATTGGTT TAACTAATGC TGAGCCTGTC
CTTAAGCTTG AGAAGCTTGC CAATGAATTA GGCATGGATA CTATAAGCCT AGGCAATACA
CTGGCTGTTG CAACTGAGTT AAGTAAAATG GGTAAGCTTA AGCTTGATGT GGATTGGAGC
GATGCAGCCT CCTACATTGA CTTAACCTAC AAGATAGCCT ACAGGGAGGG TATTGGTGAT
GAGTTGGCTG AGGGTGATTA TAGACTTGCC ATGAAGTATA ATGCCCCTGA AACCTTCACT
GGGGCTAGAG GACAAGGATT ACCTGCATAT GACCCAAGGG CGCATAAGGG CTTTGCACTT
GCTTACTATA CGGCAAATAG GGGTGGGGAT CATTTAGAGG CCTACACGCC TACATGGGAG
ATACTTAGTA CTGTCTTCGG TAAGCCAGGT AAGGTTGATC CACACGATGA CTCACCTGCC
GGTATTGATC TTCAAGCTAG GTTGGTTAAG TGGAACCAGG ACTTATTCGC AGTGGTTGAC
TCCTCAATTT TCTGTAAGTT CGAGAACCTC GTACCCAATG TTAACACTGA GCAGGATATA
GCTAACCTAT ATAATGCCGC CTATGGCTGG GATTTAACAC CTGATGATGT TTTAACCATT
GGTGAACGCA TATTTAACAT GGAGAGACTC TTCTGGGTTA GGGAGGGGAA GTGGGTTAAG
GATGAGTTAC CACCTAGGAT GAGGGAACCA ATACCTGATG GACCTGCTAA GGGTCATACA
GCTTCAAGGA TGTTTGATGA GGGTATTAAG AAGTACTATG AGTTAAGGGG ATGGGTTAAT
GGTAAGCCCA CTAGGGATAC ATTAAGGAAG CTTGGGCTTA GTGAATTTGA GTACGTACTT
TAA
 
Protein sequence
MAIFRILRVN LSTETFNEEV VKDDLLKSFL GGRGLAAYYA FKEIPRGIDP LDPSNKLYIF 
SGPLSGVATL STSRVNVTTR SVLNGVYTHS NAGGNFSYWL RRSGYDGIII EGKAEEPVYL
VVKNGEPSLK PAKHIWGKWT GSATKIILTE NGFPPDETKA GVAVIGPAGE NLVKFAGIRF
SDYERFAGRG GVGAVMGSKR LKGILVWGTR DLYRELVDKN AFMKVNNEIV KRLVTHDTTK
ALHAYGTNVL MNLVQAVGGL PHYNFAGTGL IKNVDDVSGE LIKSKYVVET HGCFNCPIAC
TQITMVKSGP FKVPGEKIKY EYENTWALGP NIGLTNAEPV LKLEKLANEL GMDTISLGNT
LAVATELSKM GKLKLDVDWS DAASYIDLTY KIAYREGIGD ELAEGDYRLA MKYNAPETFT
GARGQGLPAY DPRAHKGFAL AYYTANRGGD HLEAYTPTWE ILSTVFGKPG KVDPHDDSPA
GIDLQARLVK WNQDLFAVVD SSIFCKFENL VPNVNTEQDI ANLYNAAYGW DLTPDDVLTI
GERIFNMERL FWVREGKWVK DELPPRMREP IPDGPAKGHT ASRMFDEGIK KYYELRGWVN
GKPTRDTLRK LGLSEFEYVL