Gene Cmaq_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0335 
Symbol 
ID5709284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp371732 
End bp373111 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content45% 
IMG OID641274837 
Productglycosyl transferase family protein 
Protein accessionYP_001540171 
Protein GI159040919 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAACC CATTGACCGC GGTGGTTATT GTAGTAACCG TATTGATGAT TTACCCAATA 
CTAATACTCA TTTATGATAT TCATAATTAC TTAGCCTACA GGAGGAGGGG GATTAGGGAT
GAGGCGGTGG AGTGCATTAA TGGGCTTGGA GCCTTAAGTA TAATAATACC CACGTGGCAT
GAATCAATGG ATGCCGTTGT GGATGCTGTT AAAAGGGCGT TGGGCTTTAA TTGGCCTGGT
CCAATTGAAG TAATAGTGGT TTCGGATGAT GATGAGGATT ACGTTAATGA ACTTAAACGT
AGGGTTACTG GCCTTGGGGA TAACGTTAAG GTACTTAGGA GGATTAATAA GAATGCGGGT
AAGGCAGGGG CTATTGATTA CGGGTTTAGG CACTCCAGGG GTGATTACGT GTTAACCATG
GATGTTGACT CACTCATAGA CTCAAACTTC CCCCTTAAGG CCTGCGGCTT AATGACTAAG
AGTAATGCGG CTGCTGTGGC TGGTAGATGG TTTGGTTATA ATACTGATAC ACTAATCTCC
GAAGCCGTCA CGGCATCAAT GAACCTAGCC GTAGACACTA TACAGGGTGG TAGGAGGGCG
AGGGGTTTAC CTGCCTTAGT GGTTGGGACG GGTACGATGT TTAAGGCTAG TGCGCTCAGG
GAGGTGGATG GGTGGAGTGG TAGTGGGCCT CAGGATGATA TATATATCTG GCTTAAGTTA
ATATCAAGGG GTTTCGATGT AGGTTTCATT GATGGTAAGG TTGTTGGTGT TGAGAACCCG
AGGACGTACA GTGTCTTTAA GTTTCAACAA AGTAAGTGGG CTTATGGTGT TGCTGATGCA
TTAAGGAGAA TGATTAGAAG ACTCATGAGT AGTGGTGTTA GTGCCAGGGT TAAGTTTGAT
GCCTTACTAT TACTAACCCA ATACGTAACT CCTGCATTAT TCATTTTAAG TAGCCTAATT
ATTGGGGTTA CTTCAATACT CCTGGGGGGT TTCATAGGCT TAGCCACACT ACCCCTACTC
ACCCTATATG GTGCACTCGC CTTAGCCTAC GGCTACATAC CATTAAGAAC AGGGAACGGG
GGGTTGACGC CTTACTCTGC GGGTAGGTCG TCAGCCATGG TTATGGCTAT GAGTCTGCAG
GTTCTTTACT CATACATTAA GGGTTCCCTG GGACTAAGCT TTAAGGGGTG GGATGTTACA
CCTAAGGGTG GGTTAACGGT GATTAAGGCT TTACCCATTG AAACAATAAT GATGATGACC
TTCACGGTGC TACTAATCCT TAACCTAATC CACGGTTACT TATCATCATC ACTATGGGTG
GCTGTGGGTG ATGCATCATA CATATACGTT CACTACAGGT TCGCCAGGGA GATTCTTTAA
 
Protein sequence
MINPLTAVVI VVTVLMIYPI LILIYDIHNY LAYRRRGIRD EAVECINGLG ALSIIIPTWH 
ESMDAVVDAV KRALGFNWPG PIEVIVVSDD DEDYVNELKR RVTGLGDNVK VLRRINKNAG
KAGAIDYGFR HSRGDYVLTM DVDSLIDSNF PLKACGLMTK SNAAAVAGRW FGYNTDTLIS
EAVTASMNLA VDTIQGGRRA RGLPALVVGT GTMFKASALR EVDGWSGSGP QDDIYIWLKL
ISRGFDVGFI DGKVVGVENP RTYSVFKFQQ SKWAYGVADA LRRMIRRLMS SGVSARVKFD
ALLLLTQYVT PALFILSSLI IGVTSILLGG FIGLATLPLL TLYGALALAY GYIPLRTGNG
GLTPYSAGRS SAMVMAMSLQ VLYSYIKGSL GLSFKGWDVT PKGGLTVIKA LPIETIMMMT
FTVLLILNLI HGYLSSSLWV AVGDASYIYV HYRFAREIL