| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0318 |
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| Symbol | |
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| ID | 5710426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 355222 |
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| End bp | 357492 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641274822 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001540156 |
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| Protein GI | 159040904 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATATTG AGGAGCTACC GCTACCAAGC TTGCTTAGGG ATTTTCTAAT AAGTAAGAGG
GGCATTAGGA CACTGTACCC GCCCCAGGAG GAGGCTATTA GGGCTGGTTT ACTGAATGGT
GAAAACATAC TCATGGTTTC AGCCACAGCC TCAGGTAAGA CGCTTCTAGC TGAAGTAGCT
GCTGTAAATA ATGTACTGGT TAATGATAAG AAGTCACTGG TGGCTGTTCC CCTGAAGGCA
TTAGCCTTCG AGAAGCTTAA TGACTTCAAC ACGTACAGTG AATTAGGCAT TAGGGTGGCT
GCCTCAACAG GTGACTATAA TAGTGAGGAT AAGTGGTTAG GCTCTTATGA TGTAATAATA
ACTACGTACG AGAAGCTTGA TAGCCTACTC AGGCTTAAAC CGAGTTGGAT ATGGAATGTT
GGGCAATTAA TAATTGATGA AATACACTTC ATTAATGATG ATGAAAGGGG ACCAATAATA
GAATCCATTG TGGCTAAGTT AAGGATGCTT AACCTTAACC CGCAGATCAT TGGATTAAGC
GCAACAATAG GCAACCCGGA GGAGTTGGCT AATTGGCTTA ACGCTAAGCT GGTTAAATCA
GATTGGAGAC CAGTTAGCCT AAGGGAGGGG GTTTACCATA AGGGTGTAGT AACGTACGTT
AATGACGGTG AAAAGAGGAT CAGCGGGCAG GGTGATTCAC TAATCAACCT AACAGTGGAC
ACGTTGAATG ATGGTGGGCA GGTACTGGTG TTCTCATCAT CAAGACAAGG CGCAGTGAGG
ATTGCTAGGA AACTGGCTGA GTATATATGT TCATCCCCAG TCAGGTACAT TGATCCTGGT
GAGGCAGGTA AATTAGCTGA GGAGGTTAGG GAGACTTCAT CATCAAGGAT ACTGGCTGAG
GAATTAACAG GCTTAATAAA ATGCGGCGTA TCCTTCCACC ACGCGGGCCT TGAGTTAGAG
GTTAGGAGGG TTATTGAGGA GGGGTTTAGG AGGGGTGTAT TAAGGGTATT AGCCTCCACA
ACGACCCTAG CGGCTGGGGT TAATTTACCT GCACGTAGGG TTATTGTGAA TGAGTATAGG
CGTTATGAAC CAGGCTACGG CTTCATTGAA ATACCTGTAA TGGAGTATAA GCAGATGGCT
GGTAGGGCAG GTAGACCAGG CCTTGACCCC TATGGTGAAG CAATAATAAT TGTTTCCAGT
AAGGATGAGG TGGATTACGT CATTGATAAG TACATTAAGT CCCCGCCGGA GTACGTTAAG
TCAAACTTCA TGAACCCTAC ATCACTTAAA TTCCACACAC TATCAGCGGT GGCAAGCCAG
TACGCTGAAA CCATTGATGA ATTAGTTAAA TTCACTTCAA ACACCTTCGC TGGGTTTCAG
GGTAAATTAT CAGCAATGAT TCAAGCTAAT TCAGTGAGGA GGATGATCAG TAGGATCATT
GATGAACTGG TTGATTACGG CTTCATAATA AGGAATGGGG ATAAACTAGA GGCCACTGAG
GTTGGTGCAG TTGTTAACAG GATGTACCTT GACCCAGATA CTGCACACGT ATTCATAATG
GGTTTGAGAA ACCTCAACAG TGACGCTGAC TTAAACGCCT ACTCACTGAT GCTTGTGGTT
AAGTCACCTA AGATACCTAA GGTTAAGGTG AGGAGGAATG AGCTTGATGA ATTAGCTCAA
CAAGCAGCCT CAATGTGGTC CTCAATACCC CTTAAACCCA GTGATGTGGA TGAGTTAGTT
AATTACCCTG AGGATTACGA GGACTTCCTA TCAGAGTTTA AAACAGCCAT GGCGCTCCTT
GAGTGGATTA ATGAGAGTAA TGAGGATCAA ATTATGAAGA CTTACGACGT CCAACCTGGG
GATTTAAGGG TGCTTTCAGA CCAAGCCGAG TGGTTAATAG GTGCACTTCA GGAATTAGCC
AGGACACTGG GGTTAAGTGG GAATGTTGTG AATGGGTTGA GGGCGCTTAG GTATAGGGTG
AAGTACGGTG TTAATGATGA ACTCCTGGAA CTGGTCGTTA ACCTTGAGGG AGTGGGTAGG
GTTAGGGCAA GGGCCCTCTA TGCCGCAGGC TATAGGTCAA TTGAGGACTT AGCTAAGGCA
AATGTAAGTG ACTTAACCAG GATACGTGGA ATAGGGGATA AGATTGCTGG TTCAATAATT
GAACAGGCTC ATCAATTAGT TAAGGATGGC AGGGTAATTA AGTTTAATGA ATCCACGGTT
AAGGGAAAGA CTAGGCGTGG TGGAGGTGGC TTACTTGACC ACATGTATTG A
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| Protein sequence | MNIEELPLPS LLRDFLISKR GIRTLYPPQE EAIRAGLLNG ENILMVSATA SGKTLLAEVA
AVNNVLVNDK KSLVAVPLKA LAFEKLNDFN TYSELGIRVA ASTGDYNSED KWLGSYDVII
TTYEKLDSLL RLKPSWIWNV GQLIIDEIHF INDDERGPII ESIVAKLRML NLNPQIIGLS
ATIGNPEELA NWLNAKLVKS DWRPVSLREG VYHKGVVTYV NDGEKRISGQ GDSLINLTVD
TLNDGGQVLV FSSSRQGAVR IARKLAEYIC SSPVRYIDPG EAGKLAEEVR ETSSSRILAE
ELTGLIKCGV SFHHAGLELE VRRVIEEGFR RGVLRVLAST TTLAAGVNLP ARRVIVNEYR
RYEPGYGFIE IPVMEYKQMA GRAGRPGLDP YGEAIIIVSS KDEVDYVIDK YIKSPPEYVK
SNFMNPTSLK FHTLSAVASQ YAETIDELVK FTSNTFAGFQ GKLSAMIQAN SVRRMISRII
DELVDYGFII RNGDKLEATE VGAVVNRMYL DPDTAHVFIM GLRNLNSDAD LNAYSLMLVV
KSPKIPKVKV RRNELDELAQ QAASMWSSIP LKPSDVDELV NYPEDYEDFL SEFKTAMALL
EWINESNEDQ IMKTYDVQPG DLRVLSDQAE WLIGALQELA RTLGLSGNVV NGLRALRYRV
KYGVNDELLE LVVNLEGVGR VRARALYAAG YRSIEDLAKA NVSDLTRIRG IGDKIAGSII
EQAHQLVKDG RVIKFNESTV KGKTRRGGGG LLDHMY
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