Gene Cmaq_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0304 
Symbol 
ID5708938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp343891 
End bp344391 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content47% 
IMG OID641274808 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001540142 
Protein GI159040890 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.792307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGA AGGTGACGCA ACCTAAGGTT AACCCAGTGG CTGGGCACTT AAATGCACTA 
GCGGTTGGGG TGAAGGAGTT CGTTAAACCC ACCAGGTTCA CTATACAGTA CCCCAGGGAG
AGGAGGTGGG TTATTGATAG GTTCAGAGGC TTCATGATTA ATGATGTTGA GAAGTGCATA
TCATGCTTCC AATGCGCGTG GGCATGCCCT GTTAACGCAA TATTCATGTA CAGGGCGCCT
AACGGTAAAT ACTACCCTGG AATAAGGTAT GAACAATGCA TACTCTGCCA CTTCTGCGTT
GACGCTTGCC CGGTTGGTTC GCTACAAGGT ACGACGATAA GTGATGGGGC GTTCCCAGAC
TTGGAGTCAA CGGTCTTTAA GCCAGAGGAT ATGCATAATC TACCTCAGTG GGATGATGAA
GCGGAGTATG TGGTTAAATA CGACTTCGAT GAGAACGGTA ACCTTAAGAT AATTAAAATG
AGGAAGAGCG AGGTGAAGTA A
 
Protein sequence
MAKKVTQPKV NPVAGHLNAL AVGVKEFVKP TRFTIQYPRE RRWVIDRFRG FMINDVEKCI 
SCFQCAWACP VNAIFMYRAP NGKYYPGIRY EQCILCHFCV DACPVGSLQG TTISDGAFPD
LESTVFKPED MHNLPQWDDE AEYVVKYDFD ENGNLKIIKM RKSEVK