| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0294 |
|---|
| Symbol | |
|---|
| ID | 5708792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 332028 |
|---|
| End bp | 332510 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641274798 |
|---|
| Product | PaREP1 protein |
|---|
| Protein accession | YP_001540132 |
|---|
| Protein GI | 159040880 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0965823 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.0513269 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTAG TACTCTCGCC TCAATTAGTT AATTTATTAA GGGAGTTAGC TGGTGGTAGG
GATGTTGAGG CCTTCATTAT TGATTTAATT GCTGAGAGGC TTGATCCACC TCATAGGGTT
AAGCTTTATC TGAGCCTACA TGAGGATTAC CTTAAATCAG CTGAGGAGCT ATATGCCAAG
GGTGATTTGA CTCAGGCTGG TGAAAAGTAC TGGGGTGCTG TTACTGCTTT GCTTAATGCT
ATAGCTGAGT CAAGGAGCTG GGAGCATTAT AGCCATAGGG ATTATGATAT TATTATTGAA
GAATTATATA AGGAGACTAA TGATAAGTCA ATTTTAGTGA ACTTCAGTAT GGCTGAAAGA
CTACACGCAA ACTTTTACCA TAACTTCATG AGTAAGGAGG GGTTTGAGGC GCATAGGGAG
GCTGTTCTTA ACCTAGTGAA TAGGTTAAGG GGAATAGTAG GCGTTATGGA ATCGCATAAT
TAA
|
|---|
| Protein sequence | MSLVLSPQLV NLLRELAGGR DVEAFIIDLI AERLDPPHRV KLYLSLHEDY LKSAEELYAK
GDLTQAGEKY WGAVTALLNA IAESRSWEHY SHRDYDIIIE ELYKETNDKS ILVNFSMAER
LHANFYHNFM SKEGFEAHRE AVLNLVNRLR GIVGVMESHN
|
|---|
| |