Gene Cmaq_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0292 
Symbol 
ID5709849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp330587 
End bp331420 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content46% 
IMG OID641274796 
Producthypothetical protein 
Protein accessionYP_001540130 
Protein GI159040878 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.379037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0369953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAATAA TTAATGCCGC CCCAGCATTA TCAACAGCCT TCATTTGGGC GTGGGCATCA 
GTGACGTATA AGGATTTCAT GAGTAGGTTA AACCCATTAA CCGTTAACTT CCTTAGGATG
CTTTACACCA CCATTGCCTT AGCTATTCCA GCGGCCTTAA TTGGCTTTAA CGCTGGGGCT
ATGTGGGGTT CATTAAGTGG TCTATTATCC TTAGCCTTAG GTGACTCCAT GTACTTAATG
GCCATTAACT ACACTGGAGT CTCAGTGGCT GCCCCAATAT CATACTCCTA CATACCCCTC
TCAGTACTTA TGGCTACCCT ACTGGGTGAA CCATTAACAA TACTTAAGGT TACCTCAGGA
TTACTGATAA TGCTCGGTGT ATACATGTTA TCCAGGGAGA GGACTAAGGT AACGCTTAGG
GGTGTGACCT TAGCCCTCGG TACCGCGGTT GCTTGGGCTC TTGGTCAAAC CATGATAAAG
GTGGCTGACG TTAATGGCTT AAACCCAGTA TCCATAGCCT TCATTAGGGT TGCCACTGCG
GGATTAGTTC TACTGCTGGT TAACCACATG ATGCATAATA ATTTAGCCAC CGCCATAAAG
GCAACTATAC GCACCCGCCT ACCCCTAGTG GCTGTACTGG ACCTGGGTAT TGGGGTTGCC
TTATTCGCAT ACTCAGTTAA CCTAATAGGA CTTGGCTTAA CAGTAATAGT AACGGGCTGC
ATGCCGTTGA TAGCTCAGGT AATGGCTAAG TTCATGGTTG GGGAAAGAAT AACCGTGACT
AAGATCACTG GGGCAGTGGT AATAGTACTG GCAATAACCA CAGCCTTCCT ATAG
 
Protein sequence
MLIINAAPAL STAFIWAWAS VTYKDFMSRL NPLTVNFLRM LYTTIALAIP AALIGFNAGA 
MWGSLSGLLS LALGDSMYLM AINYTGVSVA APISYSYIPL SVLMATLLGE PLTILKVTSG
LLIMLGVYML SRERTKVTLR GVTLALGTAV AWALGQTMIK VADVNGLNPV SIAFIRVATA
GLVLLLVNHM MHNNLATAIK ATIRTRLPLV AVLDLGIGVA LFAYSVNLIG LGLTVIVTGC
MPLIAQVMAK FMVGERITVT KITGAVVIVL AITTAFL