Gene Cmaq_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0289 
Symbol 
ID5708714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp328043 
End bp328396 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content40% 
IMG OID641274793 
Producthypothetical protein 
Protein accessionYP_001540127 
Protein GI159040875 
COG category[S] Function unknown 
COG ID[COG3189] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0136906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCATTA AAGTTAAACG AATCTATGAT CGAGCATCAA GTGATGATGG CGTGAGGATA 
CTTGTCGATA GGCTATGGCC TAGGGGGATT AGTAGGGAGG AGGCTAAGGT GGATTTATGG
CTTAAGGATG TAGCCCCTAG TGATGAGTTG AGGAGGTGGT TTAATCATGA TCCTAGTAAG
TGGATTGAAT TCGAGAGAAG GTACTTTAAG GAATTGGAAG GTAATCCTAA GGTGGCTATC
CTTAAGAATA TGGTAAAGGA AGGTAAGACT ATTACATTAC TTTACTCGGC TAAATCGCAG
TATAATAATG CTGTAGCCTT AAAGGAGTAC TTAGAGCTTT ATAAATCCTC ATGA
 
Protein sequence
MSIKVKRIYD RASSDDGVRI LVDRLWPRGI SREEAKVDLW LKDVAPSDEL RRWFNHDPSK 
WIEFERRYFK ELEGNPKVAI LKNMVKEGKT ITLLYSAKSQ YNNAVALKEY LELYKSS