Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0288 |
Symbol | |
ID | 5708713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 327390 |
End bp | 327926 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641274792 |
Product | hemerythrin HHE cation binding domain-containing protein |
Protein accession | YP_001540126 |
Protein GI | 159040874 |
COG category | [S] Function unknown |
COG ID | [COG3945] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.00932018 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTTAGTG TTGAGGATTT AGTGAATAAC CTTATGAATG ACCATGATGT AATCAAGGTA TCAGTGAGCA TAGTTGATAA GATGCTTGCG GAGAAGCTAT TAGATCCAAG TGATATAAAT ATGCTACTGG ATTTCTATGA GTTCTTCGTG GATAAGTGTC ATCATGTTAA GGAGGAGGTT ATATTGTTCC CATCAATAAA CATTAAACTA TATCCCTTTG AGAATAGTCC AGTGAATGTA ATGGTGATGG ATCATGGAAT ATTCAGGTAT TTAATAAGGT TGAATAGGGA ATTATTAAGC AGATTAATTA ATGGTGATCA ATCAATTAAG GACACGCTTA TGGATTATCT AGCATTGATG ACTGGACACC TTAATCAGCA TATGGAGAAG GAGGATAAGG TGCTTTTCCC TCAGGCAATG GACTTAGATA ATGTTGAAAG CAGTAGGAGT ATTGAGGATA TTGAAGCCGA GGTGGATCAT GATAAGTGGC TTCAGGTTAT TGAGAAGCTT AAGGTAAAGT ATTTAAGCAT TGATTAA
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Protein sequence | MVSVEDLVNN LMNDHDVIKV SVSIVDKMLA EKLLDPSDIN MLLDFYEFFV DKCHHVKEEV ILFPSINIKL YPFENSPVNV MVMDHGIFRY LIRLNRELLS RLINGDQSIK DTLMDYLALM TGHLNQHMEK EDKVLFPQAM DLDNVESSRS IEDIEAEVDH DKWLQVIEKL KVKYLSID
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