| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0287 |
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| Symbol | |
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| ID | 5709900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 326711 |
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| End bp | 327334 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641274791 |
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| Product | bacterio-opsin activator |
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| Protein accession | YP_001540125 |
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| Protein GI | 159040873 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0100333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAGG TTTTGATTAA AGCTTACCGC AATGATTGCC TTGTTCAGAA TACGTTAAGT
AAGCTTAACT TGGGCTTCGA TGTGTTAATG ATAAATATTA GTGATGGTAA ATCAACTCAT
TTAATAAGCA CTAATAGGCC CTTAACACGT CATGAACTTG ATTTACTAAG GGAATCTGGA
TTAAGGATGC GTAAGGTTAA CGAGAACGTA ATGTGGATTG AGTCTCCAAG CTGTTCCTCA
TGCAGGGTAC TGGGTCATGG TGGCTTTATG GTAATTGAGG GTAAATCCCT AGATTCCAAT
ACCGTAATCT ACGGTATCCT ACTGCCGTCA AGGGGTTACT TAAGAAGCCT CATGAAGGAT
TTCCTGAATG AAAGTGTCAA GGCTGAAGTA GTGTATGCTC AGGCTATTAA GGTTAAGACA
CTAACCAGTA GGCAACTTGA GGTTCTTCAA TTGGCCTACA GTAGGGGGTT GTTTGATGAT
AAGAGACGCG TAAGCATTAG TGAGCTTGCT AAGGAATTGG GCATATCCCC GGCTACGTTA
ACAGTATTGA TAAGGAGGGG TATTAAGAAG GTTCTTGAGG ATTACTTTAG GCACACGTTA
AGTGAGACCG GGTCCCATAG TTAA
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| Protein sequence | MIKVLIKAYR NDCLVQNTLS KLNLGFDVLM INISDGKSTH LISTNRPLTR HELDLLRESG
LRMRKVNENV MWIESPSCSS CRVLGHGGFM VIEGKSLDSN TVIYGILLPS RGYLRSLMKD
FLNESVKAEV VYAQAIKVKT LTSRQLEVLQ LAYSRGLFDD KRRVSISELA KELGISPATL
TVLIRRGIKK VLEDYFRHTL SETGSHS
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