Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0278 |
Symbol | |
ID | 5708831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 315087 |
End bp | 317627 |
Gene Length | 2541 bp |
Protein Length | 846 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641274782 |
Product | peptidase M1 membrane alanine aminopeptidase |
Protein accession | YP_001540116 |
Protein GI | 159040864 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0308] Aminopeptidase N |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00401975 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.000238179 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCTTTG AGAAGGCAAC ATACCTAATG GGTAGGGGTT TCACTTACCC AGACTATGAG CCACAGTACC AGAGGTACTA CGGCTACATC ATTAAGCACT TAAGCCTAAC CCTTAGGTTG AATTTAAGTG AAAAATCCAT TCAAGGCGAT GCAAGGTACA TCATTAATGT GATTAATGAT AAGGGTTACT TGGATTTCGA TGCAGCGGAA ATGAACATAA CCTCGGTTAC TGTTAATGAT TCACCAACGC GCTTTGAGTA TGATGGGCGT TCACTGAGGG TTTACTTAAA TAAGGGTGGT GAAGTTGCAG TAGCCATAAG TTATAGCGCT AAGCCAAGGA ATGGTGTACA CTTCATACTG CCTGATGAAC ACTACCCCAA TAGGAGACCT GTGATTTGGA CTCAGGGTGA AAGTGAGGAT AATCACTACT GGATACCATT GCCTGATTAC CCAAGCATGA AGTTTACCAG TGAATTAACA ATAATAGTAC CTAAGCCTCT CACCGCTGTA TCGAACGGTT ACCTGGTTGA GAGTAGAGAT TTAGGTGGGG AGACTCTTTG GCATTGGAGG CTGGATAAGC CGCACTCCTC ATATCTAATA GCCTTCGCAG CCGCTGAATT CGACGTGATT AAGGATAACT GCGGGGGTAT TGAGGTTGAG CACTATGTGC CTAAGGGTTA CGGTGAGTTA GCTAAGTTTA GCTTCCACAG GATATGCGAT ATGATTAACT TCTTCAGTGA GTACACGGGG GTTAAATACC CATGGCCAAA CTATAAGCAT GCCGTTGTAA GTGAATTCGG CGGCGGTATG GAGAATACTA CTGTAACCAT ATTAACTGAT ACTACGCTTC ATGATGAACA TGCCCAATGC CCTGGGGCTA AATTCCCCTG CCCTGGTTCA GAGGATTTTT CCTCTGATGG TTTGGTTGCT CATGAGTTGG CTCATCAGTG GTTTGGTGAC TTGGTTACTA CTAGGGATTG GGGTAATATT TGGCTTAATG AAGCCTTCGC AACGTACATG GAGGCATTAT ACACAATGCA CGCTAAGGGT CTTGATGAGT TCATATACGA ACTCTACAAT AACCTTAAGG CCTATCTCAA CGAGTATAGA CGTTACTCAA GACCCATTGT AACCAAGCTA TATAAGTACC CTGAGGAGAT GTTTGATAGG CACACGTACG AGAAAGGCTC CCTAGTACTA CACACGTTAA GAAACATAAT AGGCGAGGAA AACTTCAGGA AGGGTATTAA CATGTTCCTA ACCAGGTACG CCTACGGTAA TGCGGAGACT GAGGACTTCA GGAGGGTTAT GGAGGAGGCT GCGGCCAGGC CCCTTGACTG GTTCTTTAAT CAATTCGTCT ACTCAGCCGG TCACCCTAGT ATCAAGTACT CGTGGAGTTA TGATTCAGGC TACTTAAGGA TTAATATTAG TCAAACCCAG GGTGAGGACT CGTACCCAGT TTACAGAATA CCCATTGAAC TGGAGGTTGG TTACCAAGAT GGCTCAACTG AGTTAATTAA GATTAACCTT GAGTCAAGGG ACAATACCAT CTACCTACCT GTTAAGGGGA GGCCAGCCTA CATTTGCCTT GATCCAGGGT TTAAGGTGGC TATTAAATCA GTTACCAGCA GTAAGAGTGT TGAGGAGACT AGGGCTGAGT TGAGGAGTAG TAACGTGGCC TGTAGGCTTG AGGCCATTGA GTCATTGGCT AGGGATACTA GCTTAAGGTC TATTGAAGCC TTAACCGAGG CTTTACTTAA TGATAAGTTC TGGGGTGTTA GGGCTGAGGC TGCTAGGGCA TTGGGTAAAC TTGGGGTTTC TGACGCCGTC AAGCCCCTTA TTAATGCCCT TAACGTTGAG AAGCATCCCA GGGTTAGGCG CGCTATAGTT GAGGCTTTAG GTAACTTTAA GGGTAATGGT GACGCTGCTA AGGTGTTGGC CTCAATTTTA GTGAATAGTG GGGAAAGTTA CTACGTTAGA TCCAATGCGG CTGAGGCTCT TGGTAAAATT GGTATTAGGG ATTACTTTAA TGAATTAGTT AAGGCTCTTG ATTACCCAAG CCATAATAAC GTTATTACTC AAGGTGCATT AAGAGGCTTA GCTGAACTGG GTGGTGATGA TGCGGTTGAA GTAATCCTAA GGTATACACA GTTAGGTTAC CCAACCCTAG TGAGGGCTAC TGCTGCGCAA TTACTGGGTA GGTTCGTGGA TAATAGGCGG GTTTACGATA GGTTAATGGA GCTTCTAAGG GATCAGTACA TGAGGGTTGC TTCATCAGCC TTAAGCGCAG TGGAGTACTC CATGGATCCG AGATTCCTAG GAATCCTAGA TTCCATAGCC TCAGGCGCAG CCCCAGGTTT CATAGCCGCT GAGTTAAGCG GTAGGTTTAG GAGGTATGCT AGGGATGTTG CCGTTAAGAT AAGGGAGCAG TTGAGTAAGG GTACTGAGTA CGCTAGGTTG AGGGAGGAGA TTGAGCAGGT TAGGGAGGAG CAGAGGAGGC TGGTGGATAG GGTTAGTAGG CTTGAGGCTA AGGCTCAATG A
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Protein sequence | MSFEKATYLM GRGFTYPDYE PQYQRYYGYI IKHLSLTLRL NLSEKSIQGD ARYIINVIND KGYLDFDAAE MNITSVTVND SPTRFEYDGR SLRVYLNKGG EVAVAISYSA KPRNGVHFIL PDEHYPNRRP VIWTQGESED NHYWIPLPDY PSMKFTSELT IIVPKPLTAV SNGYLVESRD LGGETLWHWR LDKPHSSYLI AFAAAEFDVI KDNCGGIEVE HYVPKGYGEL AKFSFHRICD MINFFSEYTG VKYPWPNYKH AVVSEFGGGM ENTTVTILTD TTLHDEHAQC PGAKFPCPGS EDFSSDGLVA HELAHQWFGD LVTTRDWGNI WLNEAFATYM EALYTMHAKG LDEFIYELYN NLKAYLNEYR RYSRPIVTKL YKYPEEMFDR HTYEKGSLVL HTLRNIIGEE NFRKGINMFL TRYAYGNAET EDFRRVMEEA AARPLDWFFN QFVYSAGHPS IKYSWSYDSG YLRINISQTQ GEDSYPVYRI PIELEVGYQD GSTELIKINL ESRDNTIYLP VKGRPAYICL DPGFKVAIKS VTSSKSVEET RAELRSSNVA CRLEAIESLA RDTSLRSIEA LTEALLNDKF WGVRAEAARA LGKLGVSDAV KPLINALNVE KHPRVRRAIV EALGNFKGNG DAAKVLASIL VNSGESYYVR SNAAEALGKI GIRDYFNELV KALDYPSHNN VITQGALRGL AELGGDDAVE VILRYTQLGY PTLVRATAAQ LLGRFVDNRR VYDRLMELLR DQYMRVASSA LSAVEYSMDP RFLGILDSIA SGAAPGFIAA ELSGRFRRYA RDVAVKIREQ LSKGTEYARL REEIEQVREE QRRLVDRVSR LEAKAQ
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