Gene Cmaq_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0278 
Symbol 
ID5708831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp315087 
End bp317627 
Gene Length2541 bp 
Protein Length846 aa 
Translation table11 
GC content46% 
IMG OID641274782 
Productpeptidase M1 membrane alanine aminopeptidase 
Protein accessionYP_001540116 
Protein GI159040864 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0308] Aminopeptidase N 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00401975 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000238179 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCTTTG AGAAGGCAAC ATACCTAATG GGTAGGGGTT TCACTTACCC AGACTATGAG 
CCACAGTACC AGAGGTACTA CGGCTACATC ATTAAGCACT TAAGCCTAAC CCTTAGGTTG
AATTTAAGTG AAAAATCCAT TCAAGGCGAT GCAAGGTACA TCATTAATGT GATTAATGAT
AAGGGTTACT TGGATTTCGA TGCAGCGGAA ATGAACATAA CCTCGGTTAC TGTTAATGAT
TCACCAACGC GCTTTGAGTA TGATGGGCGT TCACTGAGGG TTTACTTAAA TAAGGGTGGT
GAAGTTGCAG TAGCCATAAG TTATAGCGCT AAGCCAAGGA ATGGTGTACA CTTCATACTG
CCTGATGAAC ACTACCCCAA TAGGAGACCT GTGATTTGGA CTCAGGGTGA AAGTGAGGAT
AATCACTACT GGATACCATT GCCTGATTAC CCAAGCATGA AGTTTACCAG TGAATTAACA
ATAATAGTAC CTAAGCCTCT CACCGCTGTA TCGAACGGTT ACCTGGTTGA GAGTAGAGAT
TTAGGTGGGG AGACTCTTTG GCATTGGAGG CTGGATAAGC CGCACTCCTC ATATCTAATA
GCCTTCGCAG CCGCTGAATT CGACGTGATT AAGGATAACT GCGGGGGTAT TGAGGTTGAG
CACTATGTGC CTAAGGGTTA CGGTGAGTTA GCTAAGTTTA GCTTCCACAG GATATGCGAT
ATGATTAACT TCTTCAGTGA GTACACGGGG GTTAAATACC CATGGCCAAA CTATAAGCAT
GCCGTTGTAA GTGAATTCGG CGGCGGTATG GAGAATACTA CTGTAACCAT ATTAACTGAT
ACTACGCTTC ATGATGAACA TGCCCAATGC CCTGGGGCTA AATTCCCCTG CCCTGGTTCA
GAGGATTTTT CCTCTGATGG TTTGGTTGCT CATGAGTTGG CTCATCAGTG GTTTGGTGAC
TTGGTTACTA CTAGGGATTG GGGTAATATT TGGCTTAATG AAGCCTTCGC AACGTACATG
GAGGCATTAT ACACAATGCA CGCTAAGGGT CTTGATGAGT TCATATACGA ACTCTACAAT
AACCTTAAGG CCTATCTCAA CGAGTATAGA CGTTACTCAA GACCCATTGT AACCAAGCTA
TATAAGTACC CTGAGGAGAT GTTTGATAGG CACACGTACG AGAAAGGCTC CCTAGTACTA
CACACGTTAA GAAACATAAT AGGCGAGGAA AACTTCAGGA AGGGTATTAA CATGTTCCTA
ACCAGGTACG CCTACGGTAA TGCGGAGACT GAGGACTTCA GGAGGGTTAT GGAGGAGGCT
GCGGCCAGGC CCCTTGACTG GTTCTTTAAT CAATTCGTCT ACTCAGCCGG TCACCCTAGT
ATCAAGTACT CGTGGAGTTA TGATTCAGGC TACTTAAGGA TTAATATTAG TCAAACCCAG
GGTGAGGACT CGTACCCAGT TTACAGAATA CCCATTGAAC TGGAGGTTGG TTACCAAGAT
GGCTCAACTG AGTTAATTAA GATTAACCTT GAGTCAAGGG ACAATACCAT CTACCTACCT
GTTAAGGGGA GGCCAGCCTA CATTTGCCTT GATCCAGGGT TTAAGGTGGC TATTAAATCA
GTTACCAGCA GTAAGAGTGT TGAGGAGACT AGGGCTGAGT TGAGGAGTAG TAACGTGGCC
TGTAGGCTTG AGGCCATTGA GTCATTGGCT AGGGATACTA GCTTAAGGTC TATTGAAGCC
TTAACCGAGG CTTTACTTAA TGATAAGTTC TGGGGTGTTA GGGCTGAGGC TGCTAGGGCA
TTGGGTAAAC TTGGGGTTTC TGACGCCGTC AAGCCCCTTA TTAATGCCCT TAACGTTGAG
AAGCATCCCA GGGTTAGGCG CGCTATAGTT GAGGCTTTAG GTAACTTTAA GGGTAATGGT
GACGCTGCTA AGGTGTTGGC CTCAATTTTA GTGAATAGTG GGGAAAGTTA CTACGTTAGA
TCCAATGCGG CTGAGGCTCT TGGTAAAATT GGTATTAGGG ATTACTTTAA TGAATTAGTT
AAGGCTCTTG ATTACCCAAG CCATAATAAC GTTATTACTC AAGGTGCATT AAGAGGCTTA
GCTGAACTGG GTGGTGATGA TGCGGTTGAA GTAATCCTAA GGTATACACA GTTAGGTTAC
CCAACCCTAG TGAGGGCTAC TGCTGCGCAA TTACTGGGTA GGTTCGTGGA TAATAGGCGG
GTTTACGATA GGTTAATGGA GCTTCTAAGG GATCAGTACA TGAGGGTTGC TTCATCAGCC
TTAAGCGCAG TGGAGTACTC CATGGATCCG AGATTCCTAG GAATCCTAGA TTCCATAGCC
TCAGGCGCAG CCCCAGGTTT CATAGCCGCT GAGTTAAGCG GTAGGTTTAG GAGGTATGCT
AGGGATGTTG CCGTTAAGAT AAGGGAGCAG TTGAGTAAGG GTACTGAGTA CGCTAGGTTG
AGGGAGGAGA TTGAGCAGGT TAGGGAGGAG CAGAGGAGGC TGGTGGATAG GGTTAGTAGG
CTTGAGGCTA AGGCTCAATG A
 
Protein sequence
MSFEKATYLM GRGFTYPDYE PQYQRYYGYI IKHLSLTLRL NLSEKSIQGD ARYIINVIND 
KGYLDFDAAE MNITSVTVND SPTRFEYDGR SLRVYLNKGG EVAVAISYSA KPRNGVHFIL
PDEHYPNRRP VIWTQGESED NHYWIPLPDY PSMKFTSELT IIVPKPLTAV SNGYLVESRD
LGGETLWHWR LDKPHSSYLI AFAAAEFDVI KDNCGGIEVE HYVPKGYGEL AKFSFHRICD
MINFFSEYTG VKYPWPNYKH AVVSEFGGGM ENTTVTILTD TTLHDEHAQC PGAKFPCPGS
EDFSSDGLVA HELAHQWFGD LVTTRDWGNI WLNEAFATYM EALYTMHAKG LDEFIYELYN
NLKAYLNEYR RYSRPIVTKL YKYPEEMFDR HTYEKGSLVL HTLRNIIGEE NFRKGINMFL
TRYAYGNAET EDFRRVMEEA AARPLDWFFN QFVYSAGHPS IKYSWSYDSG YLRINISQTQ
GEDSYPVYRI PIELEVGYQD GSTELIKINL ESRDNTIYLP VKGRPAYICL DPGFKVAIKS
VTSSKSVEET RAELRSSNVA CRLEAIESLA RDTSLRSIEA LTEALLNDKF WGVRAEAARA
LGKLGVSDAV KPLINALNVE KHPRVRRAIV EALGNFKGNG DAAKVLASIL VNSGESYYVR
SNAAEALGKI GIRDYFNELV KALDYPSHNN VITQGALRGL AELGGDDAVE VILRYTQLGY
PTLVRATAAQ LLGRFVDNRR VYDRLMELLR DQYMRVASSA LSAVEYSMDP RFLGILDSIA
SGAAPGFIAA ELSGRFRRYA RDVAVKIREQ LSKGTEYARL REEIEQVREE QRRLVDRVSR
LEAKAQ