Gene Cmaq_0268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0268 
Symbol 
ID5709244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp306021 
End bp306848 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content41% 
IMG OID641274771 
Producthypothetical protein 
Protein accessionYP_001540106 
Protein GI159040854 
COG category[S] Function unknown 
COG ID[COG2106] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000102281 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000000197232 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATATTA GTATTGCAAT ACCGTACAAT GTAACTGAGG AATCCACCAC GGAGGAGGAG 
GCTGTTAGGA AGATAGGCTA CATAGGTAGG GCGGCGGCAA TATTTAGGGT TAGGAGCATA
TTAATCTACA CCTTTAAGGG TGATGAACCT TTAAGGAAAG CATCATTCAT AAAGAAGAAC
CTGGAGTACC TAGTGACTCC ACCGTATTTA AGGAAGGACT TATTTGGAAT AGACCCTGAC
CTAAGGCTTG CTGGGTTACT TCAACCATTA ACACTACCAG TGTTTGGTCA TAGGAAATCT
AACCCAAGGA CAGGGGACGT GAGGATTGGC TTAGTGATTA GGTGGGAGGG GTATTACTCA
ATAGTTAAGG TGGGTGAGGA TACTTACGTT AAGGTACCTA AACCATACCC AATTAAGTCA
ATGCTACTGG TTTCAATAGA CTCAATGATT AGTAATAGGT TTTACAGGGG ACATGTGGTG
AAGAGTAGTA AGGTGTATGC AGGCTACAGT GCTAATATAA TTGAATTAAG GGACTTAGTT
AAATTAAGGA ACCTAATACT CACAGGTAAG GAGGGGAACA GTGTTATTAA TGAGATTAAT
AAACTAAGGG CGCTTAAGGA TGAGGATGTT GTAGTCGTCT TCGGATCCCC ACGCATGGGT
GTTGACGACA TACTTAAGGG TGAGGGATTA GGGGATGTGC TTAATTCATC ATTATTCGTG
AACTTCGTGC CTAATCAAGG GCTTGTAACC ATAAGGACTG AGGAGGCTAT AATAGCGGTT
TTATCAATAC TTAACATTAT TAACGCCATT TCAAGCGAAG GTAAATGA
 
Protein sequence
MNISIAIPYN VTEESTTEEE AVRKIGYIGR AAAIFRVRSI LIYTFKGDEP LRKASFIKKN 
LEYLVTPPYL RKDLFGIDPD LRLAGLLQPL TLPVFGHRKS NPRTGDVRIG LVIRWEGYYS
IVKVGEDTYV KVPKPYPIKS MLLVSIDSMI SNRFYRGHVV KSSKVYAGYS ANIIELRDLV
KLRNLILTGK EGNSVINEIN KLRALKDEDV VVVFGSPRMG VDDILKGEGL GDVLNSSLFV
NFVPNQGLVT IRTEEAIIAV LSILNIINAI SSEGK