Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0264 |
Symbol | |
ID | 5709697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 301962 |
End bp | 303134 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641274767 |
Product | peptide chain release factor 1 |
Protein accession | YP_001540102 |
Protein GI | 159040850 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1503] Peptide chain release factor 1 (eRF1) |
TIGRFAM ID | [TIGR00108] peptide chain release factor eRF/aRF, subunit 1 [TIGR03676] peptide chain release factor 1, archaeal and eukaryotic forms |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00000000379955 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGTTAAAGG TTGATGGTGT CCTAGGTGGA CGCACTGGAA TAACAGATGG GGAGGAGTTG AAGATAATGA TTCAATTACT GAAGAAATAC AGGGGTTATG CAACAACCTT AATATCACTC TACATTAATG GGGATAGGCC AATACCAGAT GTCTTAAACA TGCTTAGGAA TGAGTGGTCG GTTGCAAGTA ACATTAAGGA TAAGACAACT AGGACTCATG TTCAAGATGC CTTGGAGAGG ATAATTAACG CATTAAAGGG TACGGCTAAA GCACCACCCA ATGGTTTAGC GGTATTCGGA GGCTTCCACA TGGAGAAGCC GGGTAGCTAT AAGTGGGTCA TGTACGCTAT AATACCCCCA TATAAGATAA GTACGTATAA GTACGTCTGC GATACTCGCT TCCACACTGA GCTCCTTGAG GATATGATAT CGGCATCATC ATCAGTGTTC GGGATAATAG TTATTGAGAG GGGGGAGGCT GTCATAGCGT TACTTAAGGG TAGTTACTGG GAGATAGTGG ATAAGGTCGA GTTCTTCGTA CCCAATAAGC ATCATGCAGG TGGTCAATCA GCCTTAAGGT TTAAGAGACA GACTGAACAC CTGGCTGAGA CATTCTATAA GCTCGTTGCC GAGGATGCTA ATAAGATACT GCTTCAAATA CCGAACCTTA AGGGTATTAT TGTAGCTGGC CCAGGGCCAA CTAAGGAGGA CTTCCTTAAG GAGGGTGGCT TAGATAGTAG ACTCATGGAT AAGATAATTG CAATAGTACC CGCCTGCTGT GCAGATATTA GTGGTGTATT GGAGGCTATT AAGGCCTCTG AGGATAAGCT TAAGGAGACT GAGTATGTTA AGGCTAAGAA ACTGATGGAG GAGGTAATGT ATATTGCCGT TAAGAAGCCT GACTACATAG TCTATGGTAG GGATAACGTG TTGAACGCCA TTGAGAAGGG TATTGCCAAG GTTGTGTTAA TAAGTGAGGA TATTGGTGAG GATGAGATCT TTAAATTAAC AACAATGCTT AGGGGTAAGA AAATAGACCT AGTAGTCATA CCGAATAGCG TTGAGGAGAG CCTAACCCTA AGCAAAACCT TCGGCGGATA CGTGGCCATA TTGGCTACCC CATCATGGAT AATTGAGGAG TGGGAAAACG CCAGTCAAAG CTTAACTCAG TAG
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Protein sequence | MLKVDGVLGG RTGITDGEEL KIMIQLLKKY RGYATTLISL YINGDRPIPD VLNMLRNEWS VASNIKDKTT RTHVQDALER IINALKGTAK APPNGLAVFG GFHMEKPGSY KWVMYAIIPP YKISTYKYVC DTRFHTELLE DMISASSSVF GIIVIERGEA VIALLKGSYW EIVDKVEFFV PNKHHAGGQS ALRFKRQTEH LAETFYKLVA EDANKILLQI PNLKGIIVAG PGPTKEDFLK EGGLDSRLMD KIIAIVPACC ADISGVLEAI KASEDKLKET EYVKAKKLME EVMYIAVKKP DYIVYGRDNV LNAIEKGIAK VVLISEDIGE DEIFKLTTML RGKKIDLVVI PNSVEESLTL SKTFGGYVAI LATPSWIIEE WENASQSLTQ
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