Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0261 |
Symbol | |
ID | 5709752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 298235 |
End bp | 299161 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641274764 |
Product | homoserine kinase |
Protein accession | YP_001540099 |
Protein GI | 159040847 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0083] Homoserine kinase |
TIGRFAM ID | [TIGR00191] homoserine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00000622844 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGGTACTG AGGAGTTGAT TATTGAGGCT CCCGCATCAA TAGCCAACCT TGGTCCTGCC TTTGATGTTG CTGCGCTTGC CATTAATCCA CCAAGTGATA TTGTTAAGGT TAAGGTAACT GATGGTGATG GTGTATTCAT AAGGAATAGC GGTGAATACG CCTCCAGCCT ACCCAGTGAG GGTAATGGGA ACTCAGCCTA CTTGGTGGCT ACTAGGGCTA TTGAGTTAGC TGGGTTAAGG AGGAGGATTG AGATTGAGGT TATTAAGCGT ATTAAACCCG CCAGTGGATT AGGGAGTAGT GGTGCAACAT CTGCTGCTGT GGCTTACGCA TTGAATAAGT TACTTAACCT AAGCCTGAGT GAATGGGACT TAGTTGAATT AGCCTCCTAC GGTGAATTAG CCTCAGCTGG GGTGAGGCAT ATGGATAATG TAGCCGCATC ACTACTGGGT GGTTTAGTTC TTGTCAACCC AGTGATTAGG AGGGTTATTA GGGTTAACTT CCCTGAGTTA AGCATAGTGG TGGTTATTGA GGGTTCTAAA CCAAACACCG GTTTCATGAG GAGTATCCTA CCTAAGGCCT ATGAGTTAAG CGACGTGGTT GCGAATATGG CTAATGTCGC CCAATTAGTT GCGTCAGTTT TAATGAATGA CCTAGACTTA TTCTCAAGGG TTATCACAAA TGATAGGGTT GCAATGCCCT ACAGGGTTAA GGCTTATGAG CATTGGGGTG TTGTTAAGAG TGTGCTTGAG AATCATGGCG CCTTAGGCGT AATATTAAGT GGAGCTGGGC CATCCATAGC GGCTTTCTTT AAGGAGAAGC CTCAGGTTAA TGAGATTAAA ACCGAGTTAA TGAGTGCTGG GTTAAGTCCA GTGGTTATTT TAACTAAGCC ATCCAATGAG GGGGCTAGGG AAATTAATCA TTATTAA
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Protein sequence | MGTEELIIEA PASIANLGPA FDVAALAINP PSDIVKVKVT DGDGVFIRNS GEYASSLPSE GNGNSAYLVA TRAIELAGLR RRIEIEVIKR IKPASGLGSS GATSAAVAYA LNKLLNLSLS EWDLVELASY GELASAGVRH MDNVAASLLG GLVLVNPVIR RVIRVNFPEL SIVVVIEGSK PNTGFMRSIL PKAYELSDVV ANMANVAQLV ASVLMNDLDL FSRVITNDRV AMPYRVKAYE HWGVVKSVLE NHGALGVILS GAGPSIAAFF KEKPQVNEIK TELMSAGLSP VVILTKPSNE GAREINHY
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