Gene Cmaq_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0259 
Symbol 
ID5710115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp295324 
End bp296205 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content45% 
IMG OID641274762 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001540097 
Protein GI159040845 
COG category[R] General function prediction only 
COG ID[COG3970] Fumarylacetoacetate (FAA) hydrolase family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000269221 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGATAT TCAGGTTAAC TAACGGGGAG TCAACGTTCC AATACGCTGT GGTGGATGGT 
AAGGTGTTTG AACTCGGTGT TGATCCTGTA AAGGCCCTTA TTAGCTATGC CAATGGTAAG
GTAATAGGTC TTGGAGCTGA GGTTAATATT GATGTTAATC AATTACTGAG TAGGGACTAT
AGGAGTAGTG GTTTAAGGTT CACTAAGCCC TATGACCCAC CTGAGGTTTG GGGAAGTGGG
ATTAGTTATG AAGTTTCAAG GAGGAGGTAC TCTGAGGAGG GTGAGGTGGC TAGGATTGGT
GAATTAACTA TTTATGAGAG GGTTTATGAT GCTGAGAGGC CTGAAATATT CTTTAAGGCA
ACAGCCAATA GGTGTGTTGG GCATGGTGAA CCAATAGCTG TTAGAGGCGA CTCAGAGTGG
ACGCTCCCTG AGCCTGAATT AGGTGTTGTG ATAACAAGCA GTGGTAAGGT AATTGGGTAC
ACTATTATTG ATGATGTGTC GGCAAGGGAT ATTGAGGCTG AGAACCCGCT CTACCTGCCT
CAATCAAAGG TCTACAATGG CTGCTGTGCC TTCGGTCCAT TCGTGGTTAC GCCTGATGAG
GTTAAGAACC CATATTCGCT TCAAATTAGG CTAAGGATAA TTAGGAGTGG TAAAGCCATT
TACGAGGGGG AGGTGAGCAC TGAGCGTATG AGGAGGAGGA TTGATGAACA GATTAAGTAC
CTTATAAGGA ATAACACCGT GCCTGATGGT ACAATCCTAA TGACCGGCAC CGGGATACTG
CCTGGTAGGG ATGCTGCATT AAGGGATGGT GATGTTGTTG AAATCAGTAT TAGTGGGGTA
GGTACGTTAA CGACGCCTGT TATTAAGCTT AAGGTTGAGT AA
 
Protein sequence
MRIFRLTNGE STFQYAVVDG KVFELGVDPV KALISYANGK VIGLGAEVNI DVNQLLSRDY 
RSSGLRFTKP YDPPEVWGSG ISYEVSRRRY SEEGEVARIG ELTIYERVYD AERPEIFFKA
TANRCVGHGE PIAVRGDSEW TLPEPELGVV ITSSGKVIGY TIIDDVSARD IEAENPLYLP
QSKVYNGCCA FGPFVVTPDE VKNPYSLQIR LRIIRSGKAI YEGEVSTERM RRRIDEQIKY
LIRNNTVPDG TILMTGTGIL PGRDAALRDG DVVEISISGV GTLTTPVIKL KVE