Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0259 |
Symbol | |
ID | 5710115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 295324 |
End bp | 296205 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641274762 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_001540097 |
Protein GI | 159040845 |
COG category | [R] General function prediction only |
COG ID | [COG3970] Fumarylacetoacetate (FAA) hydrolase family protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000269221 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGGATAT TCAGGTTAAC TAACGGGGAG TCAACGTTCC AATACGCTGT GGTGGATGGT AAGGTGTTTG AACTCGGTGT TGATCCTGTA AAGGCCCTTA TTAGCTATGC CAATGGTAAG GTAATAGGTC TTGGAGCTGA GGTTAATATT GATGTTAATC AATTACTGAG TAGGGACTAT AGGAGTAGTG GTTTAAGGTT CACTAAGCCC TATGACCCAC CTGAGGTTTG GGGAAGTGGG ATTAGTTATG AAGTTTCAAG GAGGAGGTAC TCTGAGGAGG GTGAGGTGGC TAGGATTGGT GAATTAACTA TTTATGAGAG GGTTTATGAT GCTGAGAGGC CTGAAATATT CTTTAAGGCA ACAGCCAATA GGTGTGTTGG GCATGGTGAA CCAATAGCTG TTAGAGGCGA CTCAGAGTGG ACGCTCCCTG AGCCTGAATT AGGTGTTGTG ATAACAAGCA GTGGTAAGGT AATTGGGTAC ACTATTATTG ATGATGTGTC GGCAAGGGAT ATTGAGGCTG AGAACCCGCT CTACCTGCCT CAATCAAAGG TCTACAATGG CTGCTGTGCC TTCGGTCCAT TCGTGGTTAC GCCTGATGAG GTTAAGAACC CATATTCGCT TCAAATTAGG CTAAGGATAA TTAGGAGTGG TAAAGCCATT TACGAGGGGG AGGTGAGCAC TGAGCGTATG AGGAGGAGGA TTGATGAACA GATTAAGTAC CTTATAAGGA ATAACACCGT GCCTGATGGT ACAATCCTAA TGACCGGCAC CGGGATACTG CCTGGTAGGG ATGCTGCATT AAGGGATGGT GATGTTGTTG AAATCAGTAT TAGTGGGGTA GGTACGTTAA CGACGCCTGT TATTAAGCTT AAGGTTGAGT AA
|
Protein sequence | MRIFRLTNGE STFQYAVVDG KVFELGVDPV KALISYANGK VIGLGAEVNI DVNQLLSRDY RSSGLRFTKP YDPPEVWGSG ISYEVSRRRY SEEGEVARIG ELTIYERVYD AERPEIFFKA TANRCVGHGE PIAVRGDSEW TLPEPELGVV ITSSGKVIGY TIIDDVSARD IEAENPLYLP QSKVYNGCCA FGPFVVTPDE VKNPYSLQIR LRIIRSGKAI YEGEVSTERM RRRIDEQIKY LIRNNTVPDG TILMTGTGIL PGRDAALRDG DVVEISISGV GTLTTPVIKL KVE
|
| |