Gene Cmaq_0255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0255 
Symbol 
ID5709721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp290642 
End bp291787 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content47% 
IMG OID641274757 
ProductN-acetylglucosamine-6-phosphate deacetylase 
Protein accessionYP_001540093 
Protein GI159040841 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1820] N-acetylglucosamine-6-phosphate deacetylase 
TIGRFAM ID[TIGR00221] N-acetylglucosamine-6-phosphate deacetylase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0123247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAGC GTAGGGTTAG GGTGGATAAG CTATATACCC CAATGCACGT ACTCCATGAT 
GCGGTTCTCG TAGTGGAAAA CGGTAAGGTA GTGGGCTTGG AGGAGGGGGG TTCCTTTGAT
GTTGATTACA GGGGTTACTC AGCCGCACCA GGGCTTGTGG ATACTCACAC TCATGGCTGC
GGTGGAATTG AGGTAACCTT AATTAAGGCA ACTAATGAAT TAGGTAAGTT AGCAGAGTGC
TACGCTAAAT TCGGCGTAAC CTCATTCCTC CCCACCACTG TTTCCGCGTC CCATGAAACC
TTAATGAGGG TGGCTGGAGT TATTAGGCAG TATAAGGGTG ATGGGGTTAA GGGGGCTAGG
GTCCTCGGCC TTAACCTAGA GGGCCCTTAC ATAAACCCTA AGAGAAAGGG GGCTCAGAAT
CCATCAGTGA TAAGGTTACC TAATGTACAT GAGTTTAACC AGTACTATGA GGAGTCAGGG
GGCTTAATAA GAGTAATGAC CATCGCCCCC GAGGTTGAGG GTGCGTTAAG CCTTATTCAA
CACTTATCCA GTATTGGGGT AATACCCAGC ATAGGCCACA CTGACGCCGA CTACGGCACA
GTAATGAAGG CCATAACCCT AGGCGCCTCC AGGGCAACGC ACTTGTTTGA TGCAATGACG
GGTATTCATC ATAGGGAATT GGGGGCCGCC ATGGCTTTAC TGGATTCTGA GGATGTTTAC
ATTGAGTTGA TAACTGACTT AATTCACCTG AAGCCTGAAA CAATATTATT CGCATTAAAG
TACGCTGGCT TACATAGGGT ATTAGCGGTA ACAGACTCAA TATCAGCCGC AGGCCTTGGT
GAGGGGGAGT ATGAGTTAGG GGGTTTAAGG GTTATTGTGA AGGGTGGTAG GGCAACCCTA
CCTGATGGTA CATTAGCTGG AAGCGTATTA ACCATGGATA ACGCCCTAAA GAACCTAGTG
AAGATTGGGT TAAGGCTTAG TGATGCATTA AGGCTTACTT CAACTAATCC AGCTCAATCA
ATTGGTGAAA GTAACATCGG GTGCCTTAAG CCAGGTTGCT TAGCCGACTT CATAATACTT
GATGATGACT TAAGGGTAAT GGCCACGTAC GTTAATGGCT CTATTGTTTA CGCTAGTGAA
ATATGA
 
Protein sequence
MVQRRVRVDK LYTPMHVLHD AVLVVENGKV VGLEEGGSFD VDYRGYSAAP GLVDTHTHGC 
GGIEVTLIKA TNELGKLAEC YAKFGVTSFL PTTVSASHET LMRVAGVIRQ YKGDGVKGAR
VLGLNLEGPY INPKRKGAQN PSVIRLPNVH EFNQYYEESG GLIRVMTIAP EVEGALSLIQ
HLSSIGVIPS IGHTDADYGT VMKAITLGAS RATHLFDAMT GIHHRELGAA MALLDSEDVY
IELITDLIHL KPETILFALK YAGLHRVLAV TDSISAAGLG EGEYELGGLR VIVKGGRATL
PDGTLAGSVL TMDNALKNLV KIGLRLSDAL RLTSTNPAQS IGESNIGCLK PGCLADFIIL
DDDLRVMATY VNGSIVYASE I