Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0250 |
Symbol | |
ID | 5709930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 284481 |
End bp | 285332 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641274752 |
Product | hypothetical protein |
Protein accession | YP_001540088 |
Protein GI | 159040836 |
COG category | [S] Function unknown |
COG ID | [COG1578] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.540172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.258484 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGTATA TAGACTATGC AGAATGCACC TTATGCGCCT TAACGTCTAG GCTTAGTGAG TTAAAGAAGT TTAATAGGTC TGATCCTGAA TCAGTTAGGA GGATAATAGT GAGGATAGCT AATGACCTAC CTCTCGGTAG GTCTAGGACA TTTGCTAACT CCTTCGAGGA GTTATCAAGT ATAGTTGGTT CAGAGGACCC TTACGTCAGT GAGAAGGATC GTTATGAGAA GATAGCCAGG GAGGTAATTG TGCCTAGGAT TATTAATGCC AGTGAGGTTG AGTTGATTAA GGTGGCTGCA GCCGCTAACT CAGTTGATGT ACCGATGTTT AATTACACGT TTAATGAGGA CATGCTTATA CGTAGTATTA ATGAGGAGCC AATATGGTTA GGCATTAATG AGGATGAATT ATCAAATATA ATGAGGAGTG CCAGGGAGGT TACGTATGTT GTTGATAATG CAGGTGAATT CGCTGTGGAT AGTGTATTAA TTAGTAAGCT AGCCACCCAT TCAAGGGTGA CTGTTGTAAC TAGGCTTAAG CCATATGAAA CCGACGTAAC CTATGATTAC GTTAGGGGAA TGATTAAGGA CAGTAACGTC AACATTGTTA ACACAGGTAA CCGTTACCCA GCTTTCCTGA GTGATGCAAT CTACGATAAT TACATTAAGA AGTCTGACTT AGTGATATCA AAGGGTGTGG GTAATTTTGA GGCTTACCTG GAGTCTGGTA TAAGGCATCC CAATTCATTA TTCCTACTCA AGGTTAAGTG TAAGCCGCTT CAAAGGATGC TTAACGTTGA GTTTAATAAA CCCATAATAC TGCATTCAAG GTACTTAAAT TCAGGGCATT GA
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Protein sequence | MQYIDYAECT LCALTSRLSE LKKFNRSDPE SVRRIIVRIA NDLPLGRSRT FANSFEELSS IVGSEDPYVS EKDRYEKIAR EVIVPRIINA SEVELIKVAA AANSVDVPMF NYTFNEDMLI RSINEEPIWL GINEDELSNI MRSAREVTYV VDNAGEFAVD SVLISKLATH SRVTVVTRLK PYETDVTYDY VRGMIKDSNV NIVNTGNRYP AFLSDAIYDN YIKKSDLVIS KGVGNFEAYL ESGIRHPNSL FLLKVKCKPL QRMLNVEFNK PIILHSRYLN SGH
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