Gene Cmaq_0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0250 
Symbol 
ID5709930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp284481 
End bp285332 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content40% 
IMG OID641274752 
Producthypothetical protein 
Protein accessionYP_001540088 
Protein GI159040836 
COG category[S] Function unknown 
COG ID[COG1578] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.540172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.258484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGTATA TAGACTATGC AGAATGCACC TTATGCGCCT TAACGTCTAG GCTTAGTGAG 
TTAAAGAAGT TTAATAGGTC TGATCCTGAA TCAGTTAGGA GGATAATAGT GAGGATAGCT
AATGACCTAC CTCTCGGTAG GTCTAGGACA TTTGCTAACT CCTTCGAGGA GTTATCAAGT
ATAGTTGGTT CAGAGGACCC TTACGTCAGT GAGAAGGATC GTTATGAGAA GATAGCCAGG
GAGGTAATTG TGCCTAGGAT TATTAATGCC AGTGAGGTTG AGTTGATTAA GGTGGCTGCA
GCCGCTAACT CAGTTGATGT ACCGATGTTT AATTACACGT TTAATGAGGA CATGCTTATA
CGTAGTATTA ATGAGGAGCC AATATGGTTA GGCATTAATG AGGATGAATT ATCAAATATA
ATGAGGAGTG CCAGGGAGGT TACGTATGTT GTTGATAATG CAGGTGAATT CGCTGTGGAT
AGTGTATTAA TTAGTAAGCT AGCCACCCAT TCAAGGGTGA CTGTTGTAAC TAGGCTTAAG
CCATATGAAA CCGACGTAAC CTATGATTAC GTTAGGGGAA TGATTAAGGA CAGTAACGTC
AACATTGTTA ACACAGGTAA CCGTTACCCA GCTTTCCTGA GTGATGCAAT CTACGATAAT
TACATTAAGA AGTCTGACTT AGTGATATCA AAGGGTGTGG GTAATTTTGA GGCTTACCTG
GAGTCTGGTA TAAGGCATCC CAATTCATTA TTCCTACTCA AGGTTAAGTG TAAGCCGCTT
CAAAGGATGC TTAACGTTGA GTTTAATAAA CCCATAATAC TGCATTCAAG GTACTTAAAT
TCAGGGCATT GA
 
Protein sequence
MQYIDYAECT LCALTSRLSE LKKFNRSDPE SVRRIIVRIA NDLPLGRSRT FANSFEELSS 
IVGSEDPYVS EKDRYEKIAR EVIVPRIINA SEVELIKVAA AANSVDVPMF NYTFNEDMLI
RSINEEPIWL GINEDELSNI MRSAREVTYV VDNAGEFAVD SVLISKLATH SRVTVVTRLK
PYETDVTYDY VRGMIKDSNV NIVNTGNRYP AFLSDAIYDN YIKKSDLVIS KGVGNFEAYL
ESGIRHPNSL FLLKVKCKPL QRMLNVEFNK PIILHSRYLN SGH