| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0230 |
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| Symbol | |
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| ID | 5710137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 264395 |
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| End bp | 265783 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641274732 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001540068 |
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| Protein GI | 159040816 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAATT CTCTTCCCTC AGGTAGGACG TATAATGTTG TTGAGTATGG TGCTGATCCT
AAGGGTTTGG ATGATAGTAC TGGGGCTATA AATGAAGCTA TTACCCAAGC CAGTGAGACT
AGGGGTATTG TGTATATTCC TCCAGGCAAC TACTTATCAA GGAACATTAT TCTGAGGAGT
AATGTAATGT TACTCATTGA TAAGGGTGCT GTGGTTAAAT TCTCAACCGA TTACAAGTCC
TATCCAATAA TTGAGACTAG GAGAGAGGGG GTTCATCATT GTGGTGTTAT GCCGTTAATA
TTCGGTAAGG ATGTTAGGAA TGTTAGGATT ATTGGGGAGG GTGTGTTTGA TGGCCAGGGT
TACGCATGGT GGCCTATTAG GAGGTTTCGC GTTACTGAGG ATTACTGGAG GAGGCTTGTT
GAATCAGGGG GTGTTGTTGG TGATGATGGT AAAACCTGGT GGCCTACTAG GAATGCCATG
GAGGGTGCTG AGGCCTTCAG GAAAATAACC AGTGAAGGTG GGAAGCCGAG TACTGAGGAT
TGTGAGAGGT ATAGGGAGTT CTTTAGGCCT CAGCTTCTTC AACTCTATAA TGCTGAGAAC
GTGACCATAG AAGGGGTTAC GTTTAAGGAC TCACCCATGT GGACAATACA CATTCTCTAC
TCAAGGCATG TTACATTAAT AAACACTAGT AGTATTGCCC CAGATTACTC ACCAAACACT
GATGGTGTTG TCGTGGATTC CTCAAGTGAC GTTGAGGTAA GGGGCTGTAT GATTGATGTT
GGTGATGATT GCTTAGTCAT AAAGTCTGGT AGGGATGAGG AGGGTAGGAG GATTGGCATA
CCCTCAGAGA ATATTCACGC CTCAGGATGC TTAATGAAGA GGGGGCATGG TGGATTCGTT
ATTGGTAGTG AAATGTCAGG TGGTGTTAGG AATGTTTCAA TTCAGGATAG TGTATTCGAT
GGTACTGAGA GGGGTGTTAG GATTAAGACA ACTAGGGGTA GGGGTGGTTT AATTGAGAAT
GTTTACGTAA ACAACATCTA CATGAGGAAC ATAATTCATG AGGCAGTGGT AGTGGATATG
TTCTATGAGA AAAGGCCTGT TGAACCAGTA TCAGAGAGGA CGCCTAAGAT TAGGGGTGTG
GTTATTAGGA ACACATCATG TGATGGGGCA GACCAGGCGG TGCTAATAAA TGGGTTACCT
GAAATGCCCA TTGAAGACAT TATAATTGAG AATACTAGAA TAACATCAAA CAAGGGTATT
CACATTGAAA ACGCCTCAAG TATTAGGCTC AGTAATGTTA AGGTGAACTC AAGGGCGATA
CCAGTCATAA CCATGAGTAA CGTGAGAAAC ATAACGTTAG ACGACGTGAG CGGCTTATCC
ATGGAGTAA
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| Protein sequence | MINSLPSGRT YNVVEYGADP KGLDDSTGAI NEAITQASET RGIVYIPPGN YLSRNIILRS
NVMLLIDKGA VVKFSTDYKS YPIIETRREG VHHCGVMPLI FGKDVRNVRI IGEGVFDGQG
YAWWPIRRFR VTEDYWRRLV ESGGVVGDDG KTWWPTRNAM EGAEAFRKIT SEGGKPSTED
CERYREFFRP QLLQLYNAEN VTIEGVTFKD SPMWTIHILY SRHVTLINTS SIAPDYSPNT
DGVVVDSSSD VEVRGCMIDV GDDCLVIKSG RDEEGRRIGI PSENIHASGC LMKRGHGGFV
IGSEMSGGVR NVSIQDSVFD GTERGVRIKT TRGRGGLIEN VYVNNIYMRN IIHEAVVVDM
FYEKRPVEPV SERTPKIRGV VIRNTSCDGA DQAVLINGLP EMPIEDIIIE NTRITSNKGI
HIENASSIRL SNVKVNSRAI PVITMSNVRN ITLDDVSGLS ME
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