Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0229 |
Symbol | |
ID | 5709158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 262773 |
End bp | 264080 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641274731 |
Product | hypothetical protein |
Protein accession | YP_001540067 |
Protein GI | 159040815 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.745759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAATA TACCAGTGGT TTTCCTCGGT TTCTTCGAGT CCGAATTCCT GAGTAGGGAT GATGTTTTAA GGGTTCTAAA GGATGCTTAC CCTGATGTTG AGTTTAAGCC GTACAGTGTT AGTAATGTTG ATGAAGCCTT AATGCTCCTT AAGTCTGAGG CCGATGCCTC GGGTTTCCTC ATCTTCAACG TTAGGGTTAT GGCTCAGGGT ATTGTTAGGA CTATTCTGAA GAGTGGTAAG CCCATACTTT ACGTTGCTAG GACAATGGAG GGTTCACCCA ACTTCCTGAT TGATGTTGCT GACGCTGTTA GGGAGGGTTA CCCAATCCTT GGCGTGGTTA CTGAGGATGT TTTAAGTAAG AGCGTTATCG ATAAGGTTAA GTACCTTATT GCCCTCGATA AGATTAGGAG GAGTAGGGTC CTGTTGGTGA CGGCTAGGAA TCTCATAAGT TACATGAATT GGGCATTCCC AAACGCCACT GAGGTTTCCA GGGCTGTTGC TGAGCTTCAG AGGAGGTTTG GTTTAACGTT CATATTCATG GATCTTAAGG AATTCATTGA TAAGTACTAT AATGTAGTTG ATTCAAGGGA TGCTGAGGAT TGGGCTGAAA GATGGATTAA GACTGCATCT CAATTCCTTG ACCCATCAAG GATTGATGTA GTTAAGGCCG CTAGGCTTTA CTTAGCCATG AAGGCAGCCT TAAGGGACAC TGGGGCTAAT GTAATGGCCT TCGACTGCAT TATGAACGTT AATACAGGCT TAATAGATGC ATGGCCATGC TTAGGCTATA TGCAGTTTTG GTATGAGGAT ATTACACCAG TATGTGAGGC AGATGTGTAC TCAATAATAC CACTGCTGAT TGGGAAATAC CTCTTTAATA GGCCTGGTTT CGTTAATGAC CCAGGTGTGG ACGTGGTTAA TGGTAGGTTC ATTTACTGGC ACTGCTATGC ACCAACTAAT CCACATGGTT TAAGCAGGCC TGAGGTACCT TACATAATTA CTGATGCTCA TGGAGGCAGT AAGCATGCTT CAATACATGT TAAGTTACCT ATTAATGAGC CTGTTACCGT AATGGGCTTT AACCCAATTA CAGGGGTTTT AAGTATTCAC GTTGCTAAGG CTGTGGATAA CATTTACTGG AAGCAATTAT GCGCAACAAA GCTTGTTGCC TCCGGTGACG CCAGTAAGGT TGCTGAGAAG TGGGTTGTTG ATAATGGTTA CCACAGGGTA TTAATCTATG GTGACTTTAG GAGTGAGGTT AAGGAGTTCG CTAAGTTACT GGGGGTTAAG GTGATTGAGG AGGATTAA
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Protein sequence | MVNIPVVFLG FFESEFLSRD DVLRVLKDAY PDVEFKPYSV SNVDEALMLL KSEADASGFL IFNVRVMAQG IVRTILKSGK PILYVARTME GSPNFLIDVA DAVREGYPIL GVVTEDVLSK SVIDKVKYLI ALDKIRRSRV LLVTARNLIS YMNWAFPNAT EVSRAVAELQ RRFGLTFIFM DLKEFIDKYY NVVDSRDAED WAERWIKTAS QFLDPSRIDV VKAARLYLAM KAALRDTGAN VMAFDCIMNV NTGLIDAWPC LGYMQFWYED ITPVCEADVY SIIPLLIGKY LFNRPGFVND PGVDVVNGRF IYWHCYAPTN PHGLSRPEVP YIITDAHGGS KHASIHVKLP INEPVTVMGF NPITGVLSIH VAKAVDNIYW KQLCATKLVA SGDASKVAEK WVVDNGYHRV LIYGDFRSEV KEFAKLLGVK VIEED
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