Gene Cmaq_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0229 
Symbol 
ID5709158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp262773 
End bp264080 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content44% 
IMG OID641274731 
Producthypothetical protein 
Protein accessionYP_001540067 
Protein GI159040815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.745759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAATA TACCAGTGGT TTTCCTCGGT TTCTTCGAGT CCGAATTCCT GAGTAGGGAT 
GATGTTTTAA GGGTTCTAAA GGATGCTTAC CCTGATGTTG AGTTTAAGCC GTACAGTGTT
AGTAATGTTG ATGAAGCCTT AATGCTCCTT AAGTCTGAGG CCGATGCCTC GGGTTTCCTC
ATCTTCAACG TTAGGGTTAT GGCTCAGGGT ATTGTTAGGA CTATTCTGAA GAGTGGTAAG
CCCATACTTT ACGTTGCTAG GACAATGGAG GGTTCACCCA ACTTCCTGAT TGATGTTGCT
GACGCTGTTA GGGAGGGTTA CCCAATCCTT GGCGTGGTTA CTGAGGATGT TTTAAGTAAG
AGCGTTATCG ATAAGGTTAA GTACCTTATT GCCCTCGATA AGATTAGGAG GAGTAGGGTC
CTGTTGGTGA CGGCTAGGAA TCTCATAAGT TACATGAATT GGGCATTCCC AAACGCCACT
GAGGTTTCCA GGGCTGTTGC TGAGCTTCAG AGGAGGTTTG GTTTAACGTT CATATTCATG
GATCTTAAGG AATTCATTGA TAAGTACTAT AATGTAGTTG ATTCAAGGGA TGCTGAGGAT
TGGGCTGAAA GATGGATTAA GACTGCATCT CAATTCCTTG ACCCATCAAG GATTGATGTA
GTTAAGGCCG CTAGGCTTTA CTTAGCCATG AAGGCAGCCT TAAGGGACAC TGGGGCTAAT
GTAATGGCCT TCGACTGCAT TATGAACGTT AATACAGGCT TAATAGATGC ATGGCCATGC
TTAGGCTATA TGCAGTTTTG GTATGAGGAT ATTACACCAG TATGTGAGGC AGATGTGTAC
TCAATAATAC CACTGCTGAT TGGGAAATAC CTCTTTAATA GGCCTGGTTT CGTTAATGAC
CCAGGTGTGG ACGTGGTTAA TGGTAGGTTC ATTTACTGGC ACTGCTATGC ACCAACTAAT
CCACATGGTT TAAGCAGGCC TGAGGTACCT TACATAATTA CTGATGCTCA TGGAGGCAGT
AAGCATGCTT CAATACATGT TAAGTTACCT ATTAATGAGC CTGTTACCGT AATGGGCTTT
AACCCAATTA CAGGGGTTTT AAGTATTCAC GTTGCTAAGG CTGTGGATAA CATTTACTGG
AAGCAATTAT GCGCAACAAA GCTTGTTGCC TCCGGTGACG CCAGTAAGGT TGCTGAGAAG
TGGGTTGTTG ATAATGGTTA CCACAGGGTA TTAATCTATG GTGACTTTAG GAGTGAGGTT
AAGGAGTTCG CTAAGTTACT GGGGGTTAAG GTGATTGAGG AGGATTAA
 
Protein sequence
MVNIPVVFLG FFESEFLSRD DVLRVLKDAY PDVEFKPYSV SNVDEALMLL KSEADASGFL 
IFNVRVMAQG IVRTILKSGK PILYVARTME GSPNFLIDVA DAVREGYPIL GVVTEDVLSK
SVIDKVKYLI ALDKIRRSRV LLVTARNLIS YMNWAFPNAT EVSRAVAELQ RRFGLTFIFM
DLKEFIDKYY NVVDSRDAED WAERWIKTAS QFLDPSRIDV VKAARLYLAM KAALRDTGAN
VMAFDCIMNV NTGLIDAWPC LGYMQFWYED ITPVCEADVY SIIPLLIGKY LFNRPGFVND
PGVDVVNGRF IYWHCYAPTN PHGLSRPEVP YIITDAHGGS KHASIHVKLP INEPVTVMGF
NPITGVLSIH VAKAVDNIYW KQLCATKLVA SGDASKVAEK WVVDNGYHRV LIYGDFRSEV
KEFAKLLGVK VIEED