Gene Cmaq_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0228 
Symbol 
ID5709157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp262279 
End bp262734 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content42% 
IMG OID641274730 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001540066 
Protein GI159040814 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.496244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAAGG AGGGTGAAGA GGCACCTAAC TTTGAGTTAA GTGACCATAA TGGGAGTACC 
ATTAGGTTAA GTGACTATAG GGGTAGGTGG ATTGTACTCT ACTTCTTCCC CAAGGCATTC
ACCCCAGGTT GCACCATTGA GACTAAGGAA TTCTCAAGGT TATGGGATGA ACTTGAGAAA
ATGGGTGTCA CCGTATTCGG TATAAGCACT GATTCAGTTG AAACACAGAG GAAGTTCGCT
GAGAAGTATG GTGTTAAGTT TAAGCTACTT AGTGATCATG ATAAGAATGC ATCTAAGGCG
TATGGTGTAT TAGGGTTAAT TGGTATGGCT GAGAGGGTAA CCTTCATAAT TAACCCGGAG
GGTAAGGTGG TTAAGGTAAT TAAGGGTGTT AAACCTGATG AACACCCCGT TAAGGCGCTG
GAGTATTTAA GGGCAGTGAT TAAGGTTAAT AAGTAG
 
Protein sequence
MVKEGEEAPN FELSDHNGST IRLSDYRGRW IVLYFFPKAF TPGCTIETKE FSRLWDELEK 
MGVTVFGIST DSVETQRKFA EKYGVKFKLL SDHDKNASKA YGVLGLIGMA ERVTFIINPE
GKVVKVIKGV KPDEHPVKAL EYLRAVIKVN K