Gene Cmaq_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0221 
Symbol 
ID5708502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp256553 
End bp256831 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content41% 
IMG OID641274724 
Producthypothetical protein 
Protein accessionYP_001540060 
Protein GI159040808 
COG category[S] Function unknown 
COG ID[COG1888] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGATA AGGGATCATT ATTAAGGAGA ATTGTGCTTG ATGTGGATGC ACCCAGTGAA 
CTCGAGATAA TTAAGTTAGC AAGTGAGTTG GGTAGGATAA CCGGGGTTGA TGCAGTCTAC
ATTAAGGTTG AGGAAACTGA CGTGGGTGTT CTTGGCCTTA AAGTGATTAT GGAGGGTTCA
TTGGATTTTA ATGATGTTAA GAAGGTAATT GAAGTTAATG GTGCAGTCAT AAGGAGTATT
GATGAGGTTT CAGTGGGGGA ATATATTCTA AAGGGTTAG
 
Protein sequence
MGDKGSLLRR IVLDVDAPSE LEIIKLASEL GRITGVDAVY IKVEETDVGV LGLKVIMEGS 
LDFNDVKKVI EVNGAVIRSI DEVSVGEYIL KG