Gene Cmaq_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0218 
Symbol 
ID5709350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp254895 
End bp255533 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content40% 
IMG OID641274721 
ProductH+transporting two-sector ATPase E subunit 
Protein accessionYP_001540057 
Protein GI159040805 
COG category[C] Energy production and conversion 
COG ID[COG1390] Archaeal/vacuolar-type H+-ATPase subunit E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAA ACCTAGCACT CCCCTTACCA CTGTTAAGTA TGTCTGAGCA GTTGGTTAGA 
TTAATAAATA GTGTAATGGA TAAGGTTAAG GCTGATTCAG AGGAGTGGAT TAGTAATCTT
AGCCTAAAGT ATGAGGCTGA GTTAATGAGT ACTGTTGAAG ATGAGATTAA AAGACACAGT
AGTGAACTTG AGGAGGCGGA TAGGCAGGCA ATGTTGAATA GGGAGTATAA GCTGTATGAT
GCATCAATGA GCATTAAGGC AGAGTACCTG GCGTTAATCG ATGAATTAGC AAGCGATGTC
ATTAACAGTA TTAAGAAGCG TATTAACGCC GAAAGGGGTA GTGAGGCATA TGGTAAGTTA
ATGATGGTTC TCCTTAATCA AGCAATTGAG ATTACACAGT CTAAGGAATT AACGATAACG
TGTTCACCAA GGGATAAGCC TATTATTTCA TCACTGGCCG CAAAGATGGG GATTAGCGTG
GAGTTTAAGG ATGGAAGCGA GGATATGTTG GGTTTAATAG CCTCCACTAA GGATGGTTCA
GTGACATATG AGGCAACGAT CGATGACGTG TTAAACCGCA TGATAGACTA TATAAGGAGT
ATAATTAAGG AGGTTGCTGA TGAGGTGGTT AAGCAATGA
 
Protein sequence
MLKNLALPLP LLSMSEQLVR LINSVMDKVK ADSEEWISNL SLKYEAELMS TVEDEIKRHS 
SELEEADRQA MLNREYKLYD ASMSIKAEYL ALIDELASDV INSIKKRINA ERGSEAYGKL
MMVLLNQAIE ITQSKELTIT CSPRDKPIIS SLAAKMGISV EFKDGSEDML GLIASTKDGS
VTYEATIDDV LNRMIDYIRS IIKEVADEVV KQ