| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0206 |
|---|
| Symbol | |
|---|
| ID | 5709701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 243755 |
|---|
| End bp | 244807 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641274709 |
|---|
| Product | cellulase |
|---|
| Protein accession | YP_001540045 |
|---|
| Protein GI | 159040793 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1363] Cellulase M and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCCG CAACATTATC TAAACTAACC CTTGAGATTG GCCCATCAGG TTTCGAAGAT
AGGGTGATAA GAACAATAAT AAGCATGATT AGAAATCGTG TTGATGAAGT TAATGTAGAT
AACATGGGTA ACCTAATAGC GAGGATTGGT AATGGTCCTT TTAAACTAAT GATAAGTGCC
CATGCTGATG AAGTAGGTGT TATGGTTTCA CACATTGATC AAAGAGGCTT CATTAAGGTT
GTTCCAATAG GTGGGATTGA TCCATGGGTT ATGATTGAGC AGGAGTTAGT TTTCATGGGA
CGTAACGGTG ACATATATGG CACTGTTGGT GTTGATCCAC CGCACTTAAG GAGGGATAAG
CCTCCATCCA GGTTTGAGGA GCTTTACGTT GATGCCGGCT TCACCTCTAA TGATGAAGCC
TTTAAGGCAG GTATATTACC TGGTGTGGCA GGGACCTTTG CGGCGTCATT TAGGGAGAGG
GGCAGTGTAG TAATAGGTAA GGCGTTAGAT AATAGAGTCG GCTGCAGTGT ACTTGTGGAT
TTAGCTGAGG AGGCTGGGGG AATGGTTACC GGTGACTTAT CCCTTTACCT GGTTTGGAAT
ACGCAGGAGG AGGTTGGGTT AAGGGGTATA AATGCGGCTG TTAACGCCAT TAACCCAAAC
ATGGCCATTG TCGTTGAAAC AACCGTTGCC GCAGATGTTC CAACTAATCC CGAGAATGAA
TGGATAACTA GGATAGGTAA TGGTGCTGCA ATTAGGGCTT TAGATAGATC CATGATAACT
AACCCACGGT TACTATCAGC CGTATTGGAG TTAGCATCAT CAAGGGGAAT TAAGTACCAG
GTTCAAGTCA ACCCATATGG TGGCACTGAC GCCGGTGCTA TACATGTCCA CGGTACAGGT
GTACCAACAG TAGTTGTATC TACACCAGCC AGGTATATCC ACACACCCCA CTCAGTGGTT
AATCTCAGTG ATGTTGAGCA GGTTAAGTCA ATGATCACCC TAATAGTGAG GGAACATGCT
GAATTAAGTA GGGTAATGAG GATTCAGGCT TAA
|
|---|
| Protein sequence | MDAATLSKLT LEIGPSGFED RVIRTIISMI RNRVDEVNVD NMGNLIARIG NGPFKLMISA
HADEVGVMVS HIDQRGFIKV VPIGGIDPWV MIEQELVFMG RNGDIYGTVG VDPPHLRRDK
PPSRFEELYV DAGFTSNDEA FKAGILPGVA GTFAASFRER GSVVIGKALD NRVGCSVLVD
LAEEAGGMVT GDLSLYLVWN TQEEVGLRGI NAAVNAINPN MAIVVETTVA ADVPTNPENE
WITRIGNGAA IRALDRSMIT NPRLLSAVLE LASSRGIKYQ VQVNPYGGTD AGAIHVHGTG
VPTVVVSTPA RYIHTPHSVV NLSDVEQVKS MITLIVREHA ELSRVMRIQA
|
|---|
| |