| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0202 |
|---|
| Symbol | |
|---|
| ID | 5709735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 239986 |
|---|
| End bp | 240144 |
|---|
| Gene Length | 159 bp |
|---|
| Protein Length | 52 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641274705 |
|---|
| Product | ribosomal protein L39e |
|---|
| Protein accession | YP_001540041 |
|---|
| Protein GI | 159040789 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2167] Ribosomal protein L39E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.768835 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACCC ATAAGCCATT GGGCTTCAAG CTCAGGCTGG CGTCAGCAGG GAAGTCTAAT
AGGAATCCAC CAGCCTGGGT CATGGTTAAA ACAGACAGGA AGGTTACGTA CAATACTAAG
CGTAGGAATT GGAGGAGGGT TAAGCTTAAG TTAGGGTGA
|
|---|
| Protein sequence | MATHKPLGFK LRLASAGKSN RNPPAWVMVK TDRKVTYNTK RRNWRRVKLK LG
|
|---|
| |