| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0198 |
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| Symbol | |
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| ID | 5709201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 237753 |
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| End bp | 238454 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641274701 |
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| Product | putative RNA-associated protein |
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| Protein accession | YP_001540037 |
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| Protein GI | 159040785 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1500] Predicted exosome subunit |
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| TIGRFAM ID | [TIGR00291] rRNA metabolism protein, SBDS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0185659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAGTA AGAGGGTGGT TACGGTTAAG TATGATGCTA AGGGTGAGCA TTTCGAAATA
ATTGTTGACC CTGAATACGC CCTTGAATTT AAACTAGGTA AACCAATAAG CCTAGATAAG
GTTCTCATAA CTGATACCGT TTTCAGGGAC TCCAAGAGGG GGTTAAGGGC CTCTGAAATA
GCCCTTAAGA GAGTCTTCGG AACCACTGAC CACAGGAAGG CTGCTGAGAT AATACTAAGG
AACGCTGAGA TACCGTTAAC CTCAGAGCAG AGGAGGAGGC TTATTGAGGA TAAGAAGAAG
CAGATAATAG ATTGGATTAG TAGGAATTGC ATCGACGCTA GGACAAAAGC CCCCCTACCA
CCCCAGAGGA TTGAGTTAGC CTTAAATAAC GTGGATGTGG CAATTGACCC GTTTAAAGGT
GTTGATGAGC AGATTAACGA TGTGTTAAAG GCTCTTCAAA AGGTCATACC AATAAAGGTT
GCTGTAGCTA CCCTGGAGGT AACCGTTGGC CCTGAACACG GGCAGAGGGT TAAGTCAGCC
TTAGCTAGGA TGGGTAGGAT ACTTAAGGAG CAGTATGATG AGTCAGGTAA CTTAATCCTT
CAACTGGAGG TGCCGGCTGG GTTGCAGGAT ACTGTTATTG GGAAGGTTAA TGAAATGACC
CATGGGGAGA GTGAAGTTAA GTTACTTGGT GTGTCGACTT AA
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| Protein sequence | MSSKRVVTVK YDAKGEHFEI IVDPEYALEF KLGKPISLDK VLITDTVFRD SKRGLRASEI
ALKRVFGTTD HRKAAEIILR NAEIPLTSEQ RRRLIEDKKK QIIDWISRNC IDARTKAPLP
PQRIELALNN VDVAIDPFKG VDEQINDVLK ALQKVIPIKV AVATLEVTVG PEHGQRVKSA
LARMGRILKE QYDESGNLIL QLEVPAGLQD TVIGKVNEMT HGESEVKLLG VST
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