Gene Cmaq_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0197 
Symbol 
ID5709449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp236480 
End bp237721 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content46% 
IMG OID641274700 
Productphosphopyruvate hydratase 
Protein accessionYP_001540036 
Protein GI159040784 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0148] Enolase 
TIGRFAM ID[TIGR01060] phosphopyruvate hydratase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000900243 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACTA GGATAAGTAG ATTAGGTATT AGGAAGGTTT TCACAGGGAG GGGTGATTTA 
ACCGTTGAGG TTGAGGTGCA TCTTGATGAT GGATGGGGTA GGGCTATTGC ACCAGCTGGT
GCATCAAGGG GTAAGCACGA GGTTAAGTAC TTCCCAGATG AGGGCGTTGA TGCAGCTATA
GACGTCTTCA AGAGGTGGGT TGAACCAGGC CTAATAGGCA TGGATGCTGT TAACCAGGTC
GCGGTGGATA AGAAGCTTGA GGAGATTGAT GGAACCTGGG ACTTCTCTAA AATAGGGGGT
GCTGTGGCTG TGGCTACATC AATGGCTAAT GTAGTGGCTG TGGCTGATTC AAAGGGATTA
TGGCCGTATC AAGTGATTGG CGGTTCATTA GCCAACGTGA TACCATACCC ATTAGGCAAC
ACTATTGGTG GTGGTAAGCA CAGTAGGGGC CTTGGGCCTG ATTACCAGGA ATTCCTAATC
CTACCCTACG GTGCACCCGA CATATATACA GCCGTATACA CTAACATGGA GGTTCATAGG
GAGGTTGGGA GGATACTGGC TAAGGAGGAC CCAACCTTCG CTGGTGGTAG GAATGATGAG
GGGGCGTGGA CTGCTAAAAT ATCCACTGAT AAGGCCCTTG AGGTACTTAG CTCAGCTGTT
AAGGAGGTTT CAAGAAGACT TGGTGTTGAG ATTGGCCTAG GTATTGATGC CGCATCATCA
AGTATGTGGA ATGGTAAAGC CTACGTATAC ACTAATGAGG GGAGGGAGTT AACTCCAAGG
GAGCATTTTG AAAGGATTAA GAGTATAATT GAGAAGTATG ATTTAATTTA CATTGAGGAC
CCATTCCATG AGGAGGATTT CCAATCATTC GCTGAGTTAA CGGCATTGTT TAAGGATAGG
CTTATTGTTG GTGATGACTT ATTCACAACC AACCCAGATA GGTTAGCTAT TGGTATTCGT
GAGAAGGCGA CTAACGCCGT TTTAATTAAG GTTGATCAAA TAGGTACTGT GACGAGGGCC
CATGAGACTG TTAGGCTTGC GTTAAATAAT GGCTACAGGA TAGTGGTTTC ACACAGGTCT
GGTGATACTG AGAGTGGATT ATTAGCACAC ATAGCCGTTG GCTTCAAGGC ACCCATAATT
AAGACAGGCA TAATGGGTAG TGAACGCGTT GCCAAGGCTA ATGAACTATT GAGGATTTGG
GATCACTTAA GTGGTGTAGC CAGGATGGCT AAGATTAAGT AA
 
Protein sequence
MGTRISRLGI RKVFTGRGDL TVEVEVHLDD GWGRAIAPAG ASRGKHEVKY FPDEGVDAAI 
DVFKRWVEPG LIGMDAVNQV AVDKKLEEID GTWDFSKIGG AVAVATSMAN VVAVADSKGL
WPYQVIGGSL ANVIPYPLGN TIGGGKHSRG LGPDYQEFLI LPYGAPDIYT AVYTNMEVHR
EVGRILAKED PTFAGGRNDE GAWTAKISTD KALEVLSSAV KEVSRRLGVE IGLGIDAASS
SMWNGKAYVY TNEGRELTPR EHFERIKSII EKYDLIYIED PFHEEDFQSF AELTALFKDR
LIVGDDLFTT NPDRLAIGIR EKATNAVLIK VDQIGTVTRA HETVRLALNN GYRIVVSHRS
GDTESGLLAH IAVGFKAPII KTGIMGSERV AKANELLRIW DHLSGVARMA KIK