| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0196 |
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| Symbol | hppA |
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| ID | 5709448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 234243 |
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| End bp | 236426 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641274699 |
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| Product | membrane-bound proton-translocating pyrophosphatase |
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| Protein accession | YP_001540035 |
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| Protein GI | 159040783 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3808] Inorganic pyrophosphatase |
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| TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000366594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.939441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTACTT CACTAAACCC CCTAAGCCTC CCCCTAGTAA TACCATTAAT TGGGTTAGCG
TACGCACTAT ACAATACTCA CTGGGTCCTC TCAAGGGATC CTGGAGATGA GAAACTGAAA
TGGATAAGTG ATCTAATAGC TAAGGGTGCG GGGGCATTTC TTAAAAGGGA GTATAAGGTT
ATTCTCCCAA CGGGCCTAAT CCTAATGTTA ATAATAGGTG CCACATATTA CTTACTCTTC
CATTCACCAT CATTAGCAGC CTACTCAATG TTATCATTCG CCCTCGGGGC CGTGGGTAGT
GGATTAGCAG GCTACATTGG TATGTATGTC ACAACCAGGA GCGCCTCAAG AACGGCTGCA
GCGGCTAGGG GAGGTATTGA TGAGGCTCTT AAGGTTTCCT TCAGGGCTGG GAGCGTCATG
GGTATTATAC TGGCCAGTGT AGCGGTGTTA ACAGTATCAT CACTGTACTT AGCCTACTCC
GCATTGGTTA AGGATTGGGC ATTAGCCATA GCCCCCGTGG CCCTTGGTGC AAGCCTAATG
TCACTCTTCA TTAGGGTTGC TGGGGGTATT TACACTAAGG CCGCTGACTG GGGTGCGGAC
ATGGTTGGTA AGGTTGAGTC AAACATACCT GAGGATGACC CAAGGAATCC AGGGGTTATA
GCTGATAATG TGGGTGATAA TGTTGGTGAT GTTGCAGGCA TGGCCAGTGA CGTCTATGAG
AGCTTCATAG TTGTCCTCAC CGGGTCACTC ATATTAATCT CAGTATTCAA TATACCTAAG
GTATTCGCAT CACTAATACT ATCAGTAACA TCACTAGTAC TCCTCTCAAC ACTACTGGGT
ATACAGGTGG TGAGGGGGAG GGTTAGTGGG AGGGATTTAG CCTTAGCATC AATGAGGAAG
CTGGGTAATT CCCTAATAGT AACCGTGATC ATTAGTTCAC TACTTATCAT AATTTACTCA
ATACTGGTTG TTAAGCCCTT GGAGGCCATG GCCCTCTCAA TCAGTGTAAT AATGGGTTTC
GTAACAGCTG TGGCCGTATT ATACATAACC CAGTACTTCA CCCACTACAC CTACGGACCC
GTTAAGGATA TTGCTAAGCA GGCATCATTA TCAGCATCAA ATGTAATAGT TGCAGGTTAC
TCATACGGCC TACTAAGCGC CACGCCAGTA ATACTAATAG TTGCAGTAGC CCTCGGGGTA
TCATTCTACC TCGGTTACGT TTACATCCCA GCCTCAATGC CCATTGAAGG TGGTATAATG
GGTACGGCCT TGGCTTCAGT TGGCTTACTG AGCTTAGCAG GCATAGTTAT TTCACTTGAC
TCCTACGGAC CCGTTAGTGA TAATGCTAAT GGTTTAGTGG AGATGGCTGG GCTTGGTGAT
GAGACTAGGA TGGTTACTGA CGCGCTTGAT GCAATAGGCA ATACATATAA GGCTACGACT
AAGGGTTACG CCATAGCCAG TGCCGGTTTA GCATCACTAG TGTTATTCAT AGGCTTTATT
TATGAAGCAG TAAGCTACAG TAATCCAGCT AATGGCGCCT TAACCGTTGC ATTAAATTAC
CTTAATGTAA TTAATCCACT ACTCCTCGTG GGCATACTAA TGGGTGCTGT CTTAGTTTAC
GTATTCTCAT CAAGACTACT CACAGCCGTG GGTAAGGCCG CCTCTGAGCT TGTTGAGGAG
ATTAGGAGGC AATTCAGGAC GAGGAGGATT CTCGAGGGTT TAGATAAACC TGATTACGAT
AGGGCAATAG ACATAGCCAC TAGACATGCC TTAAGGGAAT TCATGCCTCC CGCATTACTG
GCTGTGGCAA TGCCAATAAT AGTTGGCTTA ACCCTGGGTT GGGTTGCCTT AGCTGGCCTA
ATACTGGGCA CTATAATAGT TGGATTCCCC AGAGCCCTAC TAATGGCTAA CGCTGGTGGC
GCATGGGATA ACGCTAAGAA ACTCATTGAG GCTATGCTTG ACCCTGAACT TGGGGGTAAG
GGTAGTGTAG CCCATAAGAA CGCAGTCATA GGTGACGTGG TTGGTGACCC ATTCAAGGAC
ACTGCGGGGC CATCCCTGAA CCCATTAATA AAGGTGGTTA ACACAGTATC AATAGTGTTC
GCGCCTGCAG TAGCCATGGT TAGTGCCGTA AACCCAGTGG CCCACTTAGG TTACTTAATA
CTACTGCTTA TTCACCTGCT TTAA
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| Protein sequence | MVTSLNPLSL PLVIPLIGLA YALYNTHWVL SRDPGDEKLK WISDLIAKGA GAFLKREYKV
ILPTGLILML IIGATYYLLF HSPSLAAYSM LSFALGAVGS GLAGYIGMYV TTRSASRTAA
AARGGIDEAL KVSFRAGSVM GIILASVAVL TVSSLYLAYS ALVKDWALAI APVALGASLM
SLFIRVAGGI YTKAADWGAD MVGKVESNIP EDDPRNPGVI ADNVGDNVGD VAGMASDVYE
SFIVVLTGSL ILISVFNIPK VFASLILSVT SLVLLSTLLG IQVVRGRVSG RDLALASMRK
LGNSLIVTVI ISSLLIIIYS ILVVKPLEAM ALSISVIMGF VTAVAVLYIT QYFTHYTYGP
VKDIAKQASL SASNVIVAGY SYGLLSATPV ILIVAVALGV SFYLGYVYIP ASMPIEGGIM
GTALASVGLL SLAGIVISLD SYGPVSDNAN GLVEMAGLGD ETRMVTDALD AIGNTYKATT
KGYAIASAGL ASLVLFIGFI YEAVSYSNPA NGALTVALNY LNVINPLLLV GILMGAVLVY
VFSSRLLTAV GKAASELVEE IRRQFRTRRI LEGLDKPDYD RAIDIATRHA LREFMPPALL
AVAMPIIVGL TLGWVALAGL ILGTIIVGFP RALLMANAGG AWDNAKKLIE AMLDPELGGK
GSVAHKNAVI GDVVGDPFKD TAGPSLNPLI KVVNTVSIVF APAVAMVSAV NPVAHLGYLI
LLLIHLL
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