| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0181 |
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| Symbol | |
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| ID | 5709017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 217431 |
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| End bp | 217853 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641274684 |
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| Product | transcriptional regulator, TrmB |
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| Protein accession | YP_001540020 |
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| Protein GI | 159040768 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2512] Uncharacterized membrane-associated protein/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.152523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCAGCCAC CTTTAGGTAA CGTAATAATG GTAATAGTAA TGATGGAGGC CTTCCTAATA
ATGGTGCTGG GTTACATGAT GTATGATGTT AAGGCTAGGT TAACTAAAGG AATACTGAGG
GTGATTAATG ATAGTATCGA ATTGGATTCA TTACCCATTA ATGATAGTAG GCCAAGGCTC
AACACTGATG AGGTTAAGGT GCTTAAGTAC CTTATGAGTA GGGGTAAGCC GGTTATTCAA
TCCATTATAG GTAAGGAACT AAACATACCT AAGTCCACGC TCTTCAGGAT AATTAAGAGG
TTAAGTGAAT TAGGGTTAGT TAACGTTGAG AAGAGGGGTA AGTATAATTA CGTCTACATT
CAGCGAACCC AAGACGTCTT AAGCATACTT AAGTCGATTA ACGAGGATTC ACCCCAAAAC
TAA
|
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| Protein sequence | MQPPLGNVIM VIVMMEAFLI MVLGYMMYDV KARLTKGILR VINDSIELDS LPINDSRPRL
NTDEVKVLKY LMSRGKPVIQ SIIGKELNIP KSTLFRIIKR LSELGLVNVE KRGKYNYVYI
QRTQDVLSIL KSINEDSPQN
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