| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0169 |
|---|
| Symbol | |
|---|
| ID | 5709737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 198613 |
|---|
| End bp | 199971 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641274672 |
|---|
| Product | DNA primase |
|---|
| Protein accession | YP_001540008 |
|---|
| Protein GI | 159040756 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0358] DNA primase (bacterial type) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0207779 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.165101 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGCAT TAACAATATC AGCCAAGTAC CTAATAGAAC TTGGCTTCGA GGTACAAGGC
ACCGTGGATA AACCAGACAT AATAGGTGCC TTATTCAGTC AAACAGAGGG TCTACTGGGC
TCTGACTTGG ATTTAAGGGA GCTTCAAAAC ACCAGTAGGA TTGGTAGGAT TGAGGTTGAG
GTTGAGCATA GGGGTGATAA AACGGTGGGT AAGGTTTACG TGCCATCAAA CCTGGATCAC
TATGAGACTG CTTTAATAGC TGCAATGCTT GAGACTGTTG ATAGGGTTGG TCCATATAAC
GCCAAGTTCC AGGTTAATTC AATTAAGGAC TTGAGGAGTG AGAAGCGTAA ATTAATAATA
GATAGGGCTA AGGAGTTGAT TAAGCTCATT GAGAGGGAGA CCATACCTGA TACTAAGGAG
CTTATGGATA AGTTCCTCGG TGAGGTTAAG CAGGGTGAGG TTGTATCATA TGGTCCAGAG
GGCTTACCTG CTGGGCCTGA TGTAGAATCC TCTGATACAG TAATAATCGT TGAGGGTAGG
GCTGATGTAG TTAACTTAAT TAAGCATGGT TATAGGAATG TAATAGCCAT AGAGGGGGCT
AGCGGTGGTA TACCTAAGAC TGTTATTGAG TTAAGCCGCA GGAAGACTAC AATAGCCTTC
ACTGATGGTG ATAGGGGTGG TGAAATGATA TTAAGGGAGC TGCTTAAGGT GGCTGACATA
GATTACATAG CCAGGGCTCC ACCAGGTAAG GAGGTTGAGC AGTTGACGGC TAAGGAGATT
GCCAAGGCCC TCAGGAATAA GATACCTGTT GAGGAGTATA TTAACCAGTT AAGTAAGAAG
GATAGGCAAA TAATTGAGGA GAGTAAGAAG CAGATTGAGC AGGCTCAAGT CCAACCATCA
GCGGCACCAA CATCCCCCCA GCCTCAGCCT GAATCAACGC AACCCACGCA GCCTATTCAA
CAGGTCCAGG TTACGCAGCA GACGCAGGTC ATTGAGGTTC CTGCCCAAAC TCAGGGTCAG
GTTCAAGTAA CTACCATGCA GCAATCCACT CAGCAGACTC CCCAACTACC CACCAGTGTT
GTTGATGAGA TTAATAAACT ATCAGGTACA CTGGAGGCTA TAATATATGA TAAGAACTGG
ACGGTGTTGA AGAGGGTTCC AGTTAGGGAT CTGCTTGATA CCCTTCAGCA GGTTAACGAT
GCGTACGCCA TTGTTTTCGA CGGGGTAGGC ACCCAGAGGC TTGTTGATGC TGCAGTTGGT
AAGGGTATTA AGATGCTTAT AATGACTAGG ATAGGTAATA TTGCTAAGGT ACCGTCTGAT
ATGGTTATTT TAACGTTCAA TGATATTATT AATAAGTAA
|
|---|
| Protein sequence | MGALTISAKY LIELGFEVQG TVDKPDIIGA LFSQTEGLLG SDLDLRELQN TSRIGRIEVE
VEHRGDKTVG KVYVPSNLDH YETALIAAML ETVDRVGPYN AKFQVNSIKD LRSEKRKLII
DRAKELIKLI ERETIPDTKE LMDKFLGEVK QGEVVSYGPE GLPAGPDVES SDTVIIVEGR
ADVVNLIKHG YRNVIAIEGA SGGIPKTVIE LSRRKTTIAF TDGDRGGEMI LRELLKVADI
DYIARAPPGK EVEQLTAKEI AKALRNKIPV EEYINQLSKK DRQIIEESKK QIEQAQVQPS
AAPTSPQPQP ESTQPTQPIQ QVQVTQQTQV IEVPAQTQGQ VQVTTMQQST QQTPQLPTSV
VDEINKLSGT LEAIIYDKNW TVLKRVPVRD LLDTLQQVND AYAIVFDGVG TQRLVDAAVG
KGIKMLIMTR IGNIAKVPSD MVILTFNDII NK
|
|---|
| |