Gene Cmaq_0166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0166 
SymbolvalS 
ID5709586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp194286 
End bp196706 
Gene Length2421 bp 
Protein Length806 aa 
Translation table11 
GC content44% 
IMG OID641274669 
Productvalyl-tRNA synthetase 
Protein accessionYP_001540005 
Protein GI159040753 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0525] Valyl-tRNA synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000560387 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.070078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCTA AACTTAAGGA GAAGTCATGG GATGTGAAGA AGGAGCTTGA GTTACTTGAA 
ATTTGGGCTA AAGAGGGTGT TAATGGTAAG GGGAATTACG GTGAGAAGAT AATAGTAATA
GATACTCCAC CACCATACAT GAGTGGTAGG CCCCATATAG GTCAATTCGC AACCTATGCT
CAAATGGATA TGATAGCTAG GTTCCATAGA ATGAGGGGGT ATTTCGTAGT GTTTCCATGG
TATGCGGATA GGAATGGATT ACCAGTGGAG GTTGAGGTTG AGAAGAGGCT TGGTAAGAGG
ATGCAGGACA TACCTAGGGC TGATTTCCTG AAGCTATGCA GGGAGCAGTT GGATGAGTAT
GAGAGGGAGT GGGTTAAGGT GCTTAGGAGA TGGGGCATAT CGGCTGAATA CATACCCAAT
GGGACTGATA GCGTTGAGTA CAGGACAATG ACTCAATCAA CATTCATAGA AATGTGGAAT
AAGGGGTTAA TCTACGAGAC TGAGAGACCA ACAATATGGT GCCCTAGGTG TGGTACAGCC
TTAGCTGAAC CTGAGGTTGA GTATCGTGAG GAGGATACTC ACTTAAATTA CATTAAATTT
AAGGTTAAGG AAACAGGCGA GGACTTAATC ATAGCGACAA CAAGACCTGA ATTACTTGCA
GCCACGGTGG CAGTAGCCTA TAATCCAAGT GACGATAGGT ACGTTAGGTT AAAGGGAATG
CATGCTGTGG TTCCATTATT TAACCAGGAG GTTCCAATAA TACCTCATCA ATCAGTTAAG
GTTGAGTTCG GGACCGGGGT GGAGATGATA AGCACCTTCG GTGACACTAG GGATTTAGCC
ATAGTTAATG AACTTAGATT ACCGACTAGA ATAGTCGTCA CCCAGGATGG TAAATTAAAG
GGGACTGGTA GATACGATGG ATTGAGTATA AGGGAGGCTA GGGAAAGAAT TATTAAGGAT
CTTGAGACAG CAGGCTTACT GGTTAAGAGG GAACCCCTTA AGCACACAGT GCCCGTTTGC
TGGCGTTGCA AGACACCGAT TGAGATAATA GTTACTAGGG AGTACTTCGT TAAGCAACTT
GAGTTTAAGG GCGAGCTCCT TAAGGTTATT GATGAGATGA CCTTCATACC GCCTGAATAC
AAGAGGACAC TTATTGATTG GGTTAATTCA CTTGAATTCG ACTGGCCAAT AAGCAGGAGG
AGGTATTATG GAACCGAGAT ACCGATATGG TATTGTGTTG ACTCAAACGG CAACGCTAAG
CCAATACTAC CTAACCCAGG TAAGTACTAT AGGCCGTGGG CTGATGAACC ACCTGAGGAG
GTTAAGGAGA AGTGTAGGGA TGGTAAATTA ATAGGTGATG ATAGAATACT GGATACTTGG
TTCGACTCAT CAATATCATG GATGTATGCC TCAGGGTACA CTAGGGATAA GTCACTGTTC
AAGGTTGCTC ACCCAAATAA GATAATTAGG CCCCAGGGCT ATGAGATAAT AAGGAGTTGG
CTATACTACT CAGTGTTAAG ATCATTACTA CTGTTCGGTA AACCACCGTT TAAGTACGTT
AGGATTAATG GCATGGGGCT TGATGAGAAG GGTGAAGCAA TGCATAAGTC TAAGGGTAAT
GTAATAGATT CCCTAGCCCC AGCTGAAAAG TACGGCGCCG ACGCCGTTAG ATTCTGGGCT
GCTGTTGCCG GTAGGCTTGG TTATGATTAT AGGTACAGTG AACACATTGT TAAGACTGGC
AGGGACTTCG TCACTAAGTT ATGGAACATA GCCAGGTTCA TCTCCCAATT CCCGGAGGTT
AATGATAACT ATGAATTAAC ACTACTGGAT AAGTTAATAT TAAATGAACT AAATAGGGTT
ACTAGGATTT ACATAAATGG ATTAAGCAAC CTGGATACCT ATGAACCAGC CACCGTGGTG
TATGAATTCC TGTGGCATGT CTTCGCAGAC CACTACATTG AGGCTGTTAA GTCAAGGGCA
TATAACCGCG ACGGCTCCTT CACAGTAACT GAGCAGAGGG GGGCGTGGTT CACGCTACAT
AGGGTTTTGG ATTACTCAAT TAAGATGCTT GCCCCAATAA TGCCATTCGT CGCCGACGCC
ATTTGGAGGG GTATTCACGG TGGAAGTGTC CATAGGGAGA CCATAAGTGA CCCTGAGCCT
TACGATGAGC CAATGGGCAA GGTACTTAGG TTATTCATGA ATGTTAACAG TGCAATATGG
GGTTATAAGA ATAAGATGAG GATAAGCCTA GCCGAGAAGC TGAATGCAGT TGTCTACGCT
CAACCCGACC TTGAACCATT AAGGAAGGAG CTTGAGGCAA TGCATAAGGT AAGCTTCAGT
TTCACTAAAC CCCCACCTGA GGCGGTGAGT ATTGGTGAGG GTGTTTACAT ACTCATGGTT
AAGAATCAAG CCTCAACATA A
 
Protein sequence
MEPKLKEKSW DVKKELELLE IWAKEGVNGK GNYGEKIIVI DTPPPYMSGR PHIGQFATYA 
QMDMIARFHR MRGYFVVFPW YADRNGLPVE VEVEKRLGKR MQDIPRADFL KLCREQLDEY
EREWVKVLRR WGISAEYIPN GTDSVEYRTM TQSTFIEMWN KGLIYETERP TIWCPRCGTA
LAEPEVEYRE EDTHLNYIKF KVKETGEDLI IATTRPELLA ATVAVAYNPS DDRYVRLKGM
HAVVPLFNQE VPIIPHQSVK VEFGTGVEMI STFGDTRDLA IVNELRLPTR IVVTQDGKLK
GTGRYDGLSI REARERIIKD LETAGLLVKR EPLKHTVPVC WRCKTPIEII VTREYFVKQL
EFKGELLKVI DEMTFIPPEY KRTLIDWVNS LEFDWPISRR RYYGTEIPIW YCVDSNGNAK
PILPNPGKYY RPWADEPPEE VKEKCRDGKL IGDDRILDTW FDSSISWMYA SGYTRDKSLF
KVAHPNKIIR PQGYEIIRSW LYYSVLRSLL LFGKPPFKYV RINGMGLDEK GEAMHKSKGN
VIDSLAPAEK YGADAVRFWA AVAGRLGYDY RYSEHIVKTG RDFVTKLWNI ARFISQFPEV
NDNYELTLLD KLILNELNRV TRIYINGLSN LDTYEPATVV YEFLWHVFAD HYIEAVKSRA
YNRDGSFTVT EQRGAWFTLH RVLDYSIKML APIMPFVADA IWRGIHGGSV HRETISDPEP
YDEPMGKVLR LFMNVNSAIW GYKNKMRISL AEKLNAVVYA QPDLEPLRKE LEAMHKVSFS
FTKPPPEAVS IGEGVYILMV KNQAST