Gene Cmaq_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0162 
Symbol 
ID5709328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp190662 
End bp191246 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content37% 
IMG OID641274665 
Producthypothetical protein 
Protein accessionYP_001540001 
Protein GI159040749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0950141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.439885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCG AGGATTCATT AATAATAATG CTTACATTAA GGTTAAGGGG TAGAATGGGC 
AGGTATCACT TAGTTGATTT ACTTGGAATA GGGGAAGGTG TAATTAAGGA TAGGTTAAGG
GAACTTAAGG AATCCGGGTT AATACAAACT TCAAGATCCG GTTCAATATT AACCAACGAT
GGGGTTAGGG AATTAAATAA ATCACTCAGT GGCTACGGTA TAGTTAATAT TCAGGAAGTA
GACTTGACAC CAGTATTTGG AAGGAAATAC AATTACTGTG TTATGGGTGG ATTAGTGAAG
TGGTCAAGTG GGATCAGTAT TATTGAGTTA AGGGATATTG GTGTGAAGAA TGGTGGTGAT
GCTGTCTTAA TAATGCATGT GAACTGCACT AGTGTGGACA TACCTTTAAC GGATCTAACA
ATTGAAAAGT TTAGTCTTGA ACTGGCATCA AGAATTAAGT CAACGTACCC CTGTGGTACA
TACGTGATTG CGGTTTGTGG AAGAACACTA TACTACTCAT TAAGGGGATT AATTGAGATT
GCTAAGGCAG TATCAATGGT TCAATTGAAT CATGGCTTAA ATTAA
 
Protein sequence
MDTEDSLIIM LTLRLRGRMG RYHLVDLLGI GEGVIKDRLR ELKESGLIQT SRSGSILTND 
GVRELNKSLS GYGIVNIQEV DLTPVFGRKY NYCVMGGLVK WSSGISIIEL RDIGVKNGGD
AVLIMHVNCT SVDIPLTDLT IEKFSLELAS RIKSTYPCGT YVIAVCGRTL YYSLRGLIEI
AKAVSMVQLN HGLN