Gene Cmaq_0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0159 
Symbol 
ID5709669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp185721 
End bp186500 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content45% 
IMG OID641274662 
Producthydrolase 
Protein accessionYP_001539998 
Protein GI159040746 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.971572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.683122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAGG AAACAAGGGT GATAACATTT GATGTGTATC AGACGGTGCT TGAGTATGGG 
GATGCGTTGA TTAAGGAGAT TGGGGAGGCG ATAAGTAAGT ACTATAGGGA GGTGGGTTAC
TCTGTGGATT CAAGCGTGGT TACTGATTAC TATAGGTTAA TGGAGAGGGA GGTTAGGGTT
AACAGGATCA TGAACCTACT ATACACCCCA CCCGCCGAGA ACACTAGGAG GTTGGTTAAG
AGGATTGGGC AGAGATATGG TATACCGTTC TCAAATAGGC TTGTTAATGA TGTTCAAAAC
GTTATAGCGG ACACCGTGGT TAATTCACAG AACATTAAAG TCATTGAGGG TGTTGAGGAG
GTGTTCAGCA TCCTTAAGGA GGAGGATTGG TTAGTGGGCA TAGTTTCAAA CGTCATATTC
TGGCCCGGTA GAGTATCTAG GGCACTCTTA ACTAGGTTTG GCTTATGGAG ATTCATAGAT
TACGCAGTCT TCTCAGATGA GGTGGGTTAC CCAAAACCAC ACCCAATAAT ATTTGAAACA
CTCATAAACT CCCTGATCGG TGATAGGGTG CCTGACGTAG TTGCGCACGT GGGTGATAAT
CTGCAGGAGG ATTTCGTTGG AGCATTAATG TACGGTATAG TGGGGGTTCT CTACGACCCA
GGCGGCGTGT ATACTCCAGT TAACTCCAGC CCCTATGAGG CCATTAAATG TAAGGCATAT
ATAATAAGAA GAACAAAGGA CGTCCTCACG CTAACAGATA CTTTGACTAA ATGCCGTTAA
 
Protein sequence
MAEETRVITF DVYQTVLEYG DALIKEIGEA ISKYYREVGY SVDSSVVTDY YRLMEREVRV 
NRIMNLLYTP PAENTRRLVK RIGQRYGIPF SNRLVNDVQN VIADTVVNSQ NIKVIEGVEE
VFSILKEEDW LVGIVSNVIF WPGRVSRALL TRFGLWRFID YAVFSDEVGY PKPHPIIFET
LINSLIGDRV PDVVAHVGDN LQEDFVGALM YGIVGVLYDP GGVYTPVNSS PYEAIKCKAY
IIRRTKDVLT LTDTLTKCR