Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0159 |
Symbol | |
ID | 5709669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 185721 |
End bp | 186500 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641274662 |
Product | hydrolase |
Protein accession | YP_001539998 |
Protein GI | 159040746 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.971572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.683122 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGAGG AAACAAGGGT GATAACATTT GATGTGTATC AGACGGTGCT TGAGTATGGG GATGCGTTGA TTAAGGAGAT TGGGGAGGCG ATAAGTAAGT ACTATAGGGA GGTGGGTTAC TCTGTGGATT CAAGCGTGGT TACTGATTAC TATAGGTTAA TGGAGAGGGA GGTTAGGGTT AACAGGATCA TGAACCTACT ATACACCCCA CCCGCCGAGA ACACTAGGAG GTTGGTTAAG AGGATTGGGC AGAGATATGG TATACCGTTC TCAAATAGGC TTGTTAATGA TGTTCAAAAC GTTATAGCGG ACACCGTGGT TAATTCACAG AACATTAAAG TCATTGAGGG TGTTGAGGAG GTGTTCAGCA TCCTTAAGGA GGAGGATTGG TTAGTGGGCA TAGTTTCAAA CGTCATATTC TGGCCCGGTA GAGTATCTAG GGCACTCTTA ACTAGGTTTG GCTTATGGAG ATTCATAGAT TACGCAGTCT TCTCAGATGA GGTGGGTTAC CCAAAACCAC ACCCAATAAT ATTTGAAACA CTCATAAACT CCCTGATCGG TGATAGGGTG CCTGACGTAG TTGCGCACGT GGGTGATAAT CTGCAGGAGG ATTTCGTTGG AGCATTAATG TACGGTATAG TGGGGGTTCT CTACGACCCA GGCGGCGTGT ATACTCCAGT TAACTCCAGC CCCTATGAGG CCATTAAATG TAAGGCATAT ATAATAAGAA GAACAAAGGA CGTCCTCACG CTAACAGATA CTTTGACTAA ATGCCGTTAA
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Protein sequence | MAEETRVITF DVYQTVLEYG DALIKEIGEA ISKYYREVGY SVDSSVVTDY YRLMEREVRV NRIMNLLYTP PAENTRRLVK RIGQRYGIPF SNRLVNDVQN VIADTVVNSQ NIKVIEGVEE VFSILKEEDW LVGIVSNVIF WPGRVSRALL TRFGLWRFID YAVFSDEVGY PKPHPIIFET LINSLIGDRV PDVVAHVGDN LQEDFVGALM YGIVGVLYDP GGVYTPVNSS PYEAIKCKAY IIRRTKDVLT LTDTLTKCR
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