Gene Cmaq_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0158 
Symbol 
ID5709554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp185272 
End bp185586 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content45% 
IMG OID641274661 
Productribosomal protein L14E 
Protein accessionYP_001539997 
Protein GI159040745 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2163] Ribosomal protein L14E/L6E/L27E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.574976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAGG TTTTTGATGT TGGGAGAGTA TGCGTTAAGC TGGCGGGTAA GGAGGCAGGG 
AAAATGTGCG TTGTAGTTGA TATAGTGGAT GAGAGATTCG TCATTGTTAC TGGACCCAAG
AACCTAACTG GTGTTAAGAG GAGGAGAACC AATGTTAAAC ACCTCGAACC AACAGAGTAC
AGAGTTGAGA TAAGTAAGGG TGCTTCAGAT GAGGAGGTGA CCAAGGCCAT TGAGGCAGCT
GGGCTCGTTG ACATTATGAA GAAGGGTGTT CAACCCAAGC TATTCATGGT ACCTACAGTT
AAGGTAACTA AGTGA
 
Protein sequence
MPKVFDVGRV CVKLAGKEAG KMCVVVDIVD ERFVIVTGPK NLTGVKRRRT NVKHLEPTEY 
RVEISKGASD EEVTKAIEAA GLVDIMKKGV QPKLFMVPTV KVTK